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Modelling disorder: the cases of wetting and DNA denaturation

机译:建模障碍:润湿和DNA变性的情况

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We study the effect of the composition of the genetic sequence on the melting temperature of double stranded DNA, using some simple analytically solvable models proposed in the framework of the wetting problem. We review previous work on disordered versions of these models and solve them when there were not preexistent solutions. We check the solutions with Monte Carlo simulations and transfer matrix numerical calculations. We present numerical evidence that suggests that the logarithmic corrections to the critical temperature due to disorder, previously found in RSOS models, apply more generally to ASOS and continuous models. The agreement between the theoretical models and experimental data shows that, in this context, disorder should be the crucial ingredient of any model while other aspects may be kept very simple, an approach that can be useful for a wider class of problems. Our work has also implications for the existence of correlations in DNA sequences.
机译:我们使用在润湿问题框架内提出的一些简单的可解析模型,研究了遗传序列的组成对双链DNA融解温度的影响。我们回顾了有关这些模型的无序版本的先前工作,并在没有预先存在的解决方案的情况下对其进行了解决。我们使用蒙特卡洛模拟和传递矩阵数值计算来检查解决方案。我们提供的数字证据表明,以前在RSOS模型中发现的对因紊乱而导致的临界温度的对数校正,更普遍地适用于ASOS和连续模型。理论模型与实验数据之间的一致性表明,在这种情况下,无序应该是任何模型的关键组成部分,而其他方面则可以保持非常简单,这种方法对于更广泛的问题很有用。我们的工作对DNA序列中相关性的存在也​​有影响。

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