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Modelling disorder: the cases of wetting and DNA denaturation

机译:模拟障碍:润湿和DNa变性的情况

摘要

We study the effect of the composition of the genetic sequence on the melting temperature ofdouble stranded DNA, using some simple analytically solvable models proposed in the framework of thewetting problem. We review previous work on disordered versions of these models and solve them whenthere were not preexistent solutions. We check the solutions with Monte Carlo simulations and transfermatrix numerical calculations. We present numerical evidence that suggests that the logarithmic correctionsto the critical temperature due to disorder, previously found in RSOS models, apply more generally toASOS and continuous models. The agreement between the theoretical models and experimental data showsthat, in this context, disorder should be the crucial ingredient of any model while other aspects may be keptvery simple, an approach that can be useful for a wider class of problems. Our work has also implicationsfor the existence of correlations in DNA sequences.
机译:我们使用一些在润湿问题框架内提出的简单可解析模型,研究了遗传序列的组成对双链DNA融解温度的影响。我们回顾了有关这些模型的无序版本的先前工作,并在没有预先存在的解决方案的情况下对其进行了解决。我们使用蒙特卡洛模拟和传递矩阵数值计算来检查解决方案。我们提供的数值证据表明,以前在RSOS模型中发现的对因紊乱而导致的临界温度进行对数校正的方法,更普遍地适用于ASOS和连续模型。理论模型与实验数据之间的一致性表明,在这种情况下,无序应该是任何模型的关键组成部分,而其他方面则可能非常简单,这种方法对于更广泛的问题很有用。我们的工作对DNA序列中相关性的存在也​​有影响。

著录项

  • 作者

    Ares Saúl; Sánchez Angel;

  • 作者单位
  • 年度 2007
  • 总页数
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类

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