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Evolution of canalizing Boolean networks

机译:布尔布尔网络的演进

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摘要

Boolean networks with canalizing functions are used to model gene regulatory networks. In order to learn how such networks may behave under evolutionary forces, we simulate the evolution of a single Boolean network by means of an adaptive walk, which allows us to explore the fitness landscape. Mutations change the connections and the functions of the nodes. Our fitness criterion is the robustness of the dynamical attractors against small perturbations. We find that with this fitness criterion the global maximum is always reached and that there is a huge neutral space of 100% fitness. Furthermore, in spite of having such a high degree of robustness, the evolved networks still share many features with “chaotic” networks.
机译:具有泛化功能的布尔网络用于建模基因调控网络。为了了解此类网络在进化力的作用下如何运行,我们通过自适应行走模拟单个布尔网络的演化,这使我们能够探索健身态势。变异会改变节点的连接和功能。我们的适用性标准是动态吸引子对小扰动的鲁棒性。我们发现,通过这种适应性标准,总能达到全局最大值,并且存在一个100%适应性的巨大中性空间。此外,尽管具有如此高的鲁棒性,但演进的网络仍与“混沌”网络共享许多功能。

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