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Design of artificial genetic regulatory networks with multiple delayed adaptive responses

机译:具有多个时滞自适应响应的人工遗传调控网络设计

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摘要

Genetic regulatory networks with adaptive responses are widely studied in biology. Usually, models consisting only of a few nodes have been considered. They present one input receptor for activation and one output node where the adaptive response is computed. In this work, we design genetic regulatory networks with many receptors and many output nodes able to produce delayed adaptive responses. This design is performed by using an evolutionary algorithm of mutations and selections that minimizes an error function defined by the adaptive response in signal shapes. We present several examples of network constructions with a predefined required set of adaptive delayed responses. We show that an output node can have different kinds of responses as a function of the activated receptor. Additionally, complex network structures are presented since processing nodes can be involved in several input-output pathways.
机译:具有适应性反应的遗传调控网络已在生物学中得到广泛研究。通常,只考虑了几个节点组成的模型。它们提供了一个用于激活的输入接收器和一个用于计算自适应响应的输出节点。在这项工作中,我们设计了具有许多受体和许多输出节点的遗传调节网络,这些受体能够产生延迟的适应性反应。通过使用突变和选择的进化算法来执行此设计,该算法可使信号形状中的自适应响应定义的误差函数最小化。我们介绍了具有预定义的自适应延迟响应的一组必需的网络构造示例。我们表明,输出节点可以根据激活的受体具有不同种类的响应。另外,由于处理节点可能涉及多个输入输出路径,因此提出了复杂的网络结构。

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