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Molecular models of natural organic matter and its colloidal aggregation in aqueous solutions: Challenges and opportunities for computer simulations

机译:天然有机物及其在水溶液中的胶体聚集的分子模型:计算机模拟的挑战与机遇

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摘要

Natural organic matter (NOM) is ubiquitous in soil and groundwater, and its aqueous complexation with various inorganic and organic species can strongly affect the specia-tion, solubility, and toxicity of many elements in the environment. Despite significant geo-chemical, environmental, and industrial interest, the molecular-scale mechanisms of the physical and chemical processes involving NOM are not yet fully understood. Recent molecular dynamics (MD) simulations using relatively simple models of NOM fragments are used here to illustrate the challenges and opportunities for the application of computational molecular modeling techniques to the structural, dynamic, and energetic characterization of metal-NOM complexation and colloidal aggregation in aqueous solutions. The predictions from large-scale MD simulations are in good qualitative agreement with available experimental observations, but also point out the need for simulations at much larger time- and length-scales with more complex NOM models in order to fully capture the diversity of molecular processes involving NOM.
机译:天然有机物(NOM)在土壤和地下水中无处不在,并且其与各种无机和有机物的水络合物可强烈影响环境中许多元素的形成,溶解度和毒性。尽管对地球化学,环境和工业都有重大兴趣,但涉及NOM的物理和化学过程的分子尺度机理尚未得到充分了解。本文使用相对简单的NOM片段模型进行最新的分子动力学(MD)模拟,以说明将计算分子建模技术应用于水溶液中金属NOM络合和胶体聚集的结构,动力学和高能表征的挑战和机遇解决方案。大规模MD模拟的预测与可用的实验观察在质量上有很好的一致性,但同时也指出需要在更大的时间尺度和更长的尺度上使用更复杂的NOM模型进行模拟,以便完全捕获分子过程的多样性。涉及NOM。

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