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Applications of GRID in Clinical Neurophysiology and Electrical Impedance Tomography of Brain Function

机译:GRID在脑功能临床神经生理学和电阻抗层析成像中的应用

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摘要

The computational requirements in Neurophysiology are increasing with the development of new analysis methods. The resources the GRID has to offer are ideally suited for this complex processing. A practical implementation of the GRID, Condor, has been assessed using a local cluster of 920 PCs. The reduction in processing time was assessed in spike recognition of the Electroencephalogram (EEG) in epilepsy using wavelets and the computationally demanding task of nonlinear image reconstruction with Electrical Impedance Tomography (EIT). Processing times were decreased by 25 and 40 times respectively. This represents a substantial improvement in processing time, but is still sub optimal due to factors such as shared access to resources and lack of checkpoints so that interrupted jobs had to be restarted. Future work will be to use these methods in non-linear EIT image reconstruction of brain function and methods for automated EEG analysis, if possible with further optimized GRID middleware.
机译:随着新的分析方法的发展,神经生理学中的计算要求不断增加。 GRID必须提供的资源非常适合这种复杂的处理。已使用920台PC的本地群集评估了GRID的实际实施方案Condor。通过使用小波对癫痫病中的脑电图(EEG)进行尖峰识别以及使用电阻抗层析成像(EIT)进行非线性图像重建的计算量大的任务,评估了处理时间的减少。处理时间分别减少了25和40倍。这代表了处理时间的显着改善,但由于诸如对资源的共享访问和缺少检查点之类的因素,仍然是次优的,因此必须重新启动中断的作业。未来的工作将是在可能的情况下,通过进一步优化的GRID中间件,在脑功能的非线性EIT图像重建中使用这些方法以及用于自动EEG分析的方法。

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