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Progressive Image Transmission in Telemicroscopy: A Quantitative Approach for Electron Microscopy Images of Biological Specimens

机译:远程显微镜中的渐进图像传输:生物标本的电子显微镜图像定量方法

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This work presents a rigorous and objective evaluation of two progressive image transmission techniques in a framework of telemicroscopy of biological specimens. First of all, a Lossless Progressive Image Codec (LPIC) which is based on a specific wavelet transform and an efficient encoding method is introduced. This system is then compared to the standard Progressive-JPEG (P-JPEG) for the specific task of detecting biological specimens in the images progressively received by a biologist controlling a remote transmission electron microscope (TEM). Both methods have been quantitatively compared by means of a task-oriented methodology that guarantees an objective comparison for the task at hand. Such a methodology is based upon a wide ensemble of artificial images resembling real electron microscopy images, as well as on a thorough set of figures of merit assessing the quality of the reconstructed images. The results that have been obtained allow to claim with statistical significance that our method outperforms the standard P-JPEG throughout the transmission process. Finally, both the progressive transmission methods LPIC and P-JPEG were applied over real electron microscopy images from different subfields of structural biology, and the results exhibited a similar behavior to that obtained for artificial images. Visualization results manifest that LPIC exhibits excellent levels of details from the very beginning, whereas P-JPEG undergoes severe blocking artifacts along the first stages of the transmission. Therefore, the conclusion of the work is that the superiority of the progressive image transmission method introduced here over P-JPEG becomes manifest for the task of detecting biological specimens in the progressively transmitted images.
机译:这项工作在生物标本的电镜的框架内,对两种渐进式图像传输技术进行了严格而客观的评估。首先,介绍了一种基于特定小波变换和有效编码方法的无损渐进图像编解码器(LPIC)。然后将该系统与标准Progressive-JPEG(P-JPEG)进行比较,以完成检测由远程控制电子显微镜(TEM)的生物学家逐步接收的图像中生物样本的特定任务。两种方法已通过面向任务的方法进行了定量比较,该方法可确保对当前任务进行客观的比较。这种方法是基于大量类似于真实电子显微镜图像的人工图像,以及基于评估重建图像质量的完整的品质因数集。获得的结果具有统计学意义,可以证明我们的方法在整个传输过程中均优于标准P-JPEG。最后,将渐进式传输方法LPIC和P-JPEG都应用于来自结构生物学不同子领域的真实电子显微镜图像,结果显示出与人工图像相似的行为。可视化结果表明,LPIC从一开始就展现出出色的细节水平,而P-JPEG在传输的第一阶段经历了严重的阻塞伪像。因此,该工作的结论是,此处介绍的逐行图像传输方法相对于P-JPEG的优越性对于在逐行传输图像中检测生物样本的任务变得显而易见。

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