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Abundant dissolved genetic material in Arctic sea ice Part I: Extracellular DNA

机译:北极海冰中大量溶解的遗传物质第一部分:细胞外DNA

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摘要

The porous medium of sea ice, a surface-rich environment characterized by low temperature and high salinity, has been proposed as a favorable site for horizontal gene transfer, but few measurements are available to assess the possibility of this mode of evolution in ice. Here, we report the first measurements of dissolved DNA in sea ice, measured by fluorescent dye staining of centrifugal-filter-concentrated samples of melted ice. Newly formed landfast and pack ice on the Canadian Arctic Shelf (ca. 71 °N, 125 °W) contained higher concentrations (scaled to volume of brine) of the major components of dissolved DNA-extracellular DNA and viruses-than the underlying seawater. Dissolved DNA was dominated by extracellular DNA in surface seawater (up to 95%), with viruses making up relatively larger fractions at depths below 100 m (up to 27%) and in thick sea ice (66-78 cm; up to 100%). Extracellular DNA was heteroge-neously distributed, with concentrations up to 135 μg DNA L~(-1) brine detected in landfast sea ice, higher than previously reported from any marine environment. Additionally, extracellular DNA was significantly highly enriched at the base of ice of medium thickness (33-37 cm), suggestive of in situ production. Relative to underlying seawater, higher concentrations of extracellular DNA, viruses, and bacteria, and the availability of numerous surfaces for attachment within the ice matrix suggest that sea ice may be a hotspot for HGT in the marine environment.
机译:海冰的多孔介质是一种具有低温和高盐度特征的富于表面的环境,已被提议作为水平基因转移的有利地点,但很少有测量方法可用于评估这种在冰中进化的可能性。在这里,我们报告了对海冰中溶解的DNA的首次测量,这是通过对离心过滤器浓缩的融冰样品进行荧光染料染色来测量的。在加拿大北极大陆架(约71°N,125°W)上新形成的陆冰和浮冰,其溶解的DNA(细胞外DNA和病毒)的主要成分的浓度(按盐水的体积定)比底层海水要高。溶解的DNA以表层海水中的细胞外DNA为主(最高95%),病毒在100 m以下深度(最高27%)和厚海冰(66-78 cm;最高100%)中占较大比例。 )。细胞外DNA异质分布,在陆地海冰中检测到的最高浓度为135μgDNA L〜(-1)盐水,高于以前在任何海洋环境中报告的浓度。此外,细胞外DNA在中等厚度(33-37厘米)的冰底处显着高度富集,提示原位生产。相对于底层海水,更高浓度的细胞外DNA,病毒和细菌,以及可附着在冰基质中的众多表面的可用性表明,海冰可能是海洋环境中HGT的热点。

著录项

  • 来源
    《Polar biology》 |2011年第12期|p.1819-1830|共12页
  • 作者单位

    School of Oceanography and Astrobiology Program, University of Washington, Box 357940, Seattle, WA, USA,Origins Institute, McMaster University, GSB 315, Hamilton, ON L8S4L8, Canada;

    School of Oceanography and Astrobiology Program, University of Washington, Box 357940, Seattle, WA, USA;

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  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

    arctic; sea ice; extracellular DNA; bacteria; viruses; horizontal gene transfer;

    机译:北极;海冰;细胞外DNA菌;病毒;水平基因转移;

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