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Structure-activity relationships of a small-molecule inhibitor of the PDZ domain of PICK1

机译:PICK1 PDZ域的小分子抑制剂的构效关系

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摘要

Recently, we described the first small-molecule inhibitor, (E)-ethylrn2-cyano-3-(3,4-dichlorophenyl)acryloylcarbamate (1), of the PDZ domain of protein interacting with Cα-kinase 1 (PICK1), a potential drug target against brain ischemia, pain and cocaine addiction. Herein, we explore structure-activity relationships of 1 by introducing subtle modifications of the acryloylcarbamate scaffold and variations of the substituents on this scaffold. The configuration around the double bond of 1 and analogues was settled by a combination of X-ray crystallography, NMR and density functional theory calculations. Thereby, docking studies were used to correlate biological affinities with structural considerations for ligand-protein interactions. The most potent analogue obtained in this study showed an improvement in affinity compared to 1 and is currently a lead in further studies of PICK 1 inhibition.
机译:最近,我们描述了第一个小分子抑制剂(E)-乙基rn2-氰基-3-(3,4-二氯苯基)丙烯酰氨基甲酸酯(1),它是与Cα-激酶1(PICK1)相互作用的蛋白质的PDZ域。针对脑缺血,疼痛和可卡因成瘾的潜在药物靶标。在这里,我们通过引入丙烯酰基氨基甲酸酯支架的细微修饰和该支架上取代基的变化来探索1的结构活性关系。通过结合X射线晶体学,NMR和密度泛函理论计算,确定了1和类似物双键周围的构型。因此,对接研究被用于将生物亲和力与配体-蛋白质相互作用的结构考虑因素相关联。在这项研究中获得的最有效的类似物与1相比显示出亲和力的改善,目前在PICK 1抑制的进一步研究中处于领先地位。

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  • 来源
    《Organic & biomolecular chemistry 》 |2010年第19期| P.4281-4288| 共8页
  • 作者单位

    Department of Medicinal Chemistry, University of Copenhagen, Universitetsparken 2, DK-2100, Copenhagen, Denmark;

    rnDepartment of Medicinal Chemistry, University of Copenhagen, Universitetsparken 2, DK-2100, Copenhagen, Denmark;

    rnDepartment of Neuroscience and Pharmacology, Panum Institute, University of Copenhagen, Blegdamsvej 3B, DK-2200, Copenhagen, Denmark;

    rnRiso National Laboratory for Sustainable Energy, Technical University of Denmark, Frederiksborgvej 399, DK-4000, Roskilde, Denmark;

    rnDepartment of Physiology and Biophysics, Weill Medical College of Cornell University, New York, NY 10021, USA;

    rnDepartment of Medicinal Chemistry, University of Copenhagen, Universitetsparken 2, DK-2100, Copenhagen, Denmark;

    rnDepartment of Medicinal Chemistry, University of Copenhagen, Universitetsparken 2, DK-2100, Copenhagen, Denmark;

    rnDepartment of Medicinal Chemistry, University of Copenhagen, Universitetsparken 2, DK-2100, Copenhagen, Denmark;

    rnDepartment of Neuroscience and Pharmacology, Panum Institute, University of Copenhagen, Blegdamsvej 3B, DK-2200, Copenhagen, Denmark;

    rnDepartment of Physiology and Biophysics, Weill Medical College of Cornell University, New York, NY 10021, USA;

    rnDepartment of Neuroscience and Pharmacology, Panum Institute, University of Copenhagen, Blegdamsvej 3B, DK-2200, Copenhagen, Denmark;

    rnDepartment of Medicinal Chemistry, University of Copenhagen, Universitetsparken 2, DK-2100, Copenhagen, Denmark;

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