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Detection of Salmonella in the intestine of Hypostomus plecostomus from the upper San Marcos River, Texas

机译:从得克萨斯州圣马科斯河上游的蛇肋小肠中检测沙门氏菌

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摘要

The prevalence of salmonellae in the intestines of the invasive suckermouth catfish Hypostomus plecostomus was assessed in the San Marcos River, just down-stream of its spring-fed headwaters. In 2014, H. plecostomus, sediment, and water samples were collected during 15 sampling events. A combination of semi-selective enrichment and quantitative polymerase chain reaction (qPCR) revealed the presence of salmonellae in 45% of the fish intestines across the entire year, with a prevalence range of 13-100% per sampling event. Repetitive element sequence-based PCR (rep-PCR) and multi-locus sequence typing (MLST) revealed a high diversity of salmonellae from fish intestine samples at individual sampling times, single or multiple presence of rep-PCR patterns and serotypes within individual fish, and identical rep-PCR patterns and serotypes for different fish within and across sampling events. Overall, 15 serotypes were identified by MLST, with a diversity range between one and seven serotypes per sampling event. Some serotypes were retrieved only once, while others were detected more frequently. A few serotypes were retrieved at several sampling times, nearly evenly distributed over the entire sampling period. Prevalence and diversity were independent of precipitation events, indicating the potential presence of environmental strains that are capable of long-term persistence in the environment.
机译:在圣马科斯河(源于春季补给源头的下游),评估了入侵性suck嘴鱼Hypostomus plecostomus肠中的沙门氏菌流行。 2014年,在15个采样事件中收集了pleostomus,沉积物和水样。半选择性富集和定量聚合酶链反应(qPCR)的结合揭示了全年45%的鱼肠中都存在沙门氏菌,每个采样事件的流行范围为13-100%。基于重复元素序列的PCR(rep-PCR)和多基因座序列分型(MLST)显示,在单个采样时间,单个鱼中单个或多个rep-PCR模式和血清型的存在下,鱼肠样品中沙门氏菌的多样性很高,以及在采样事件内和采样事件之间针对不同鱼类的相同rep-PCR模式和血清型。 MLST总共鉴定出15种血清型,每个采样事件的多样性范围在1到7种血清型之间。一些血清型仅被检索一次,而其他血清型被更频繁地检测到。在几个采样时间检索到了一些血清型,在整个采样周期内几乎均匀分布。流行和多样性与降水事件无关,表明可能长期存在于环境中的环境菌株存在。

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