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The Directive of the Protein: How Does Cytochrome P450 Select the Mechanism of Dopamine Formation?

机译:蛋白质的指令:细胞色素P450如何选择多巴胺形成的机制?

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摘要

Dopamine can be generated from tyramine via arene hydroxylation catalyzed by a cytochrome P450 enzyme (CYP2D6). Our quantum mechanical/molecular mechanical (QM/MM) results reveal the decisive impact of the protein in selecting the "best' reaction mechanism. Instead of the traditional Meisenheimer-complex mechanism, the study reveals a mechanism involving an initial hydrogen atom transfer from the phenolic hydroxyl group of the tyramine to the iron-oxo of the compound I (Cpd I), followed by a ring-π radical rebound that eventually leads to dopamine by keto-enol rearrangement. This mechanism is not viable in the gas phase since the O-H bond activation by Cpd I is endothermic and the process does not form a stable intermediate. By contrast, the in-protein reaction has a low barrier and is exothermic. It is shown that the local electric field of the protein environment serves as a template that stabilizes the intermediate of the H-abstraction step and thereby mediates the catalysis of dopamine formation at a lower energy cost. Furthermore, it is shown that external electric fields can either catalyze or inhibit the process depending on their directionality.
机译:多巴胺可以由酪胺经细胞色素P450酶(CYP2D6)催化的芳烃羟基化反应生成。我们的量子力学/分子力学(QM / MM)结果揭示了蛋白质在选择“最佳”反应机理中的决定性影响,而不是传统的Meisenheimer复杂机理,该研究揭示了一种涉及氢原子从氢原子初始转移的机理。酪胺的酚羟基与化合物I的铁氧羰基(Cpd I)结合,然后发生环π自由基反弹,最终通过酮-烯醇重排而导致多巴胺,这种机理在气相中不可行,因为Cpd I的OH键活化是吸热的,该过程不能形成稳定的中间体,相反,蛋白内反应的势垒低且是放热的,表明蛋白环境的局部电场作为模板稳定了H提取步骤的中间过程,从而以较低的能量成本介导了多巴胺形成的催化作用,此外,还表明外部电场可以催化e或禁止该过程,取决于它们的方向性。

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  • 来源
    《Journal of the American Chemical Society》 |2011年第20期|p.7977-7984|共8页
  • 作者单位

    Institute of Chemistry and the Lise Meitner-Minerva Center for Computational Quantum Chemistry, The Hebrew University of Jerusalem, 91904 Jerusalem, Israel;

    Institute of Chemistry and the Lise Meitner-Minerva Center for Computational Quantum Chemistry, The Hebrew University of Jerusalem, 91904 Jerusalem, Israel;

    Institute of Chemistry and the Lise Meitner-Minerva Center for Computational Quantum Chemistry, The Hebrew University of Jerusalem, 91904 Jerusalem, Israel;

    Institute of Chemistry and the Lise Meitner-Minerva Center for Computational Quantum Chemistry, The Hebrew University of Jerusalem, 91904 Jerusalem, Israel;

    Institute of Chemistry and the Lise Meitner-Minerva Center for Computational Quantum Chemistry, The Hebrew University of Jerusalem, 91904 Jerusalem, Israel;

  • 收录信息 美国《科学引文索引》(SCI);美国《工程索引》(EI);美国《生物学医学文摘》(MEDLINE);美国《化学文摘》(CA);
  • 原文格式 PDF
  • 正文语种 eng
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  • 入库时间 2022-08-18 03:14:16

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