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Monitoring Transmission Routes of Listeria spp.in Smoked Salmon Production with Repetitive Element Sequence-Based PCR Techniques

机译:基于重复元素序列的PCR技术监测烟熏鲑鱼中李斯特菌的传播途径

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摘要

Various techniques have been used for tracing the transmission routes of Listeria species and for the assessment of hygiene standards in food processing plants. The potential of repetitive element sequence-based PCR (Rep-PCR) methods (GTG_5 and REPⅠ + Ⅱ) for the typing of Listeria isolates (n = 116), including Listeria monocytogenes (n = 46), was evaluated in a particular situation arising from the relocation of a company producing cold-smoked salmon. Pulsed-field gel electrophoresis (PFGE) using three restriction enzymes (Apal, Ascl, and Smal) was used for comparison. Identical transmission scenarios among two companies could be identified by cluster analysis of L. monocytogenes isolates that were indistinguishable by both Rep-PCR and PFGE. The calculated diversity index (DI) indicates that Rep-PCR subtyping of Listeria species with primer sets GTG_5 and REPⅠ + Ⅱ has a lower discrimination power than does PFGE. When concatenated Rep-PCR cluster analysis was used, the DI increased from 0.934 (REPⅠ + Ⅱ) and 0.923 (GTG_5) to 0.956. The discrimination power of this method was similar to that of PFGE typing based on restriction enzyme Apal (DI = 0.955). Listeria welshimeri may be useful as an indicator for monitoring smoked salmon processing environments. Rep-PCR meets the expectations of a reasonable, fast, and low-cost molecular subtyping method for the routine monitoring of Listeria species. The discriminatory power as characterized by the DI sufficiently quantifies the probability of unrelated isolates being characterized as different subtypes. Therefore, Rep-PCR typing based on two primer systems (GTG_5 and REPⅠ + Ⅱ) may be a useful tool for monitoring industrial hygiene.
机译:已经使用了多种技术来追踪李斯特菌物种的传播途径以及评估食品加工厂的卫生标准。在特定情况下,评估了基于重复元素序列PCR(Rep-PCR)方法(GTG_5和REPⅠ+Ⅱ)对李斯特菌分离物(n = 116)(包括单核细胞增生李斯特菌)(n = 46)进行分型的潜力。从一家生产冷熏鲑鱼的公司搬迁而来。使用三种限制性酶(Apal,Ascl和Smal)的脉冲场凝胶电泳(PFGE)进行比较。可以通过对单核细胞增生李斯特氏菌分离株进行聚类分析来确定两家公司之间相同的传播情况,而Rep-PCR和PFGE不能将它们区分开。计算得出的多样性指数(DI)表明,带有引物对GTG_5和REPⅠ+Ⅱ的李斯特菌属物种的Rep-PCR亚型比PFGE具有更低的辨别力。当使用串联Rep-PCR聚类分析时,DI从0.934(REPⅠ+Ⅱ)和0.923(GTG_5)增加到0.956。该方法的鉴别能力类似于基于限制酶Apal的PFGE分型的能力(DI = 0.955)。李氏李斯特菌可用作监测烟熏三文鱼加工环境的指标。 Rep-PCR符合常规监测李斯特菌种类的合理,快速和低成本分子亚型化方法的期望。以DI表征的区分能力充分量化了无关菌株被表征为不同亚型的可能性。因此,基于两种引物系统(GTG_5和REPⅠ+Ⅱ)的Rep-PCR分型可能是监测工业卫生的有用工具。

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  • 来源
    《Journal of food protection》 |2012年第3期|p.504-511|共8页
  • 作者单位

    Department of Food Sciences and Technology, Institute of Food Science, University of Natural Resources and Life Sciences,Muthgasse 18, 1190 Vienna, Austria;

    Department of Food Sciences and Technology, Institute of Food Science, University of Natural Resources and Life Sciences,Muthgasse 18, 1190 Vienna, Austria;

    Department of Food Sciences and Technology, Institute of Food Science, University of Natural Resources and Life Sciences,Muthgasse 18, 1190 Vienna, Austria;

    Department of Food Sciences and Technology, Institute of Food Science, University of Natural Resources and Life Sciences,Muthgasse 18, 1190 Vienna, Austria;

  • 收录信息 美国《科学引文索引》(SCI);美国《化学文摘》(CA);
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
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  • 入库时间 2022-08-17 23:25:27

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