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Dynamin-binding protein gene on chromosome 10q is associated with late-onset Alzheimer's disease

机译:染色体10q上的动力蛋白结合蛋白基因与晚期阿尔茨海默氏病有关

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摘要

The apolipoprotein E (APOE) gene has been consistently shown to be a major genetic risk factor; however, all cases of Alzheimer's disease (AD) cannot be attributed to the ε4 variant of APOE, because about half of AD patients have the APOE-ε3*3 genotype. To identify an additional genetic risk factor(s), we performed large-scale single nucleotide polymorphism (SNP)-based association analysis of 1526 late-onset AD patients and 1666 control subjects in a Japanese population. We prepared two independent sets consisting of exploratory and validation samples, respectively, with only the APOE-ε3*3 genotype, and first carried out genotyping for the exploratory set with 1206 SNPs in the region between 60 and 107 Mb on chromosome 10q that is implicated by linkage studies as containing an AD susceptibility locus. Thirty-five SNPs that showed significant values (P<0.01) were followed-up to detect any association with the validation samples. Finally, six SNPs exhibited replicated significant associations (P=0.000035–0.00048) on meta-analysis of both sets. These SNPs were clustered in a locus spanning 220 kb at genomic position 101 Mb, and three of the six SNPs were located in the dynamin-binding protein (DNMBP) gene. Quantitative real-time RT–PCR analysis demonstrated that neuropathologically confirmed AD brains exhibit a significant reduction of DNMBP mRNA compared with age-matched ones (P<0.0169). Thus, we confirmed the association of DNMBP with AD individuals with the APOE-ε3*3 genotype or lacking the ε4 allele, and DNMBP may be one of the susceptibility genes for AD.
机译:载脂蛋白E(APOE)基因一直被证明是主要的遗传危险因素。但是,所有阿尔茨海默氏病(AD)病例均不能归因于APOE的ε4变异体,因为大约一半的AD患者具有APOE-ε3* 3基因型。为了确定其他遗传风险因素,我们对日本人群中的1526例迟发性AD患者和1666例对照受试者进行了基于大规模单核苷酸多态性(SNP)的关联分析。我们准备了两个独立的集合,分别由探索性样本和验证样本组成,仅具有APOE-ε3* 3基因型,并且首先对涉及10q号染色体上60至107 Mb之间的1206个SNP的探索性样本进行了基因分型。通过连锁研究发现含有AD易感基因座。跟踪显示显着值(P <0.01)的35个SNP,以检测与验证样品的任何关联。最后,在两组的荟萃分析中,六个SNP表现出重复的显着关联(P = 0.000035–0.00048)。这些SNP聚集在基因组位置101 Mb的220 kb的基因座中,六个SNP中的三个位于动力结合蛋白(DNMBP)基因中。实时定量RT-PCR分析表明,与年龄相匹配的大脑相比,经神经病理学证实的AD大脑表现出DNMBP mRNA的显着减少(P <0.0169)。因此,我们证实了DNMBP与具有APOE-ε3* 3基因型或缺少ε4等位基因的AD个体的关联,并且DNMBP可能是AD的易感基因之一。

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  • 来源
    《Human Molecular Genetics 》 |2006年第13期| 2170-2182| 共13页
  • 作者单位

    Genome Science Branch Center for Bioresource-Based Researches Brain Research Institute Niigata University Niigata 951-8585 Japan;

    Center for Transdisciplinary Research Niigata University Niigata 951-8585 Japan;

    Department of Geriatric and Complementary Medicine Advanced Research Center for Asian Traditional Medicine Tohoku University Graduate School of Medicine Sendai 980-8574 Japan;

    Department of Psychiatry Institute of Clinical Medicine University of Tsukuba Tsukuba 305-8575 Japan;

    Department of Neuropsychiatry Imagawa Clinic Fukushima-ku Osaka 553-0003 Japan;

    Department of Neurology Neuroscience and Biophysiological Science Okayama University Graduate School of Medicine and Dentistry Okayama 700-8558 Japan;

    Division of Clinical Research Kurihama Alcoholism Center National Hospital Organization Yokosuka 239-0841 Japan;

    Department of Biological Regulation Section of Environment and Health Science Faculty of Medicine Tottori University Yonago 683-8503 Japan;

    Department of Pathology and the Resource Branch for Brain Disease Brain Research Institute Niigata University Niigata 951-8585 Japan;

    Department of Medical Informatics Niigata University Niigata 951-8520 Japan;

    National Center for Neurology and Psychiatry Kodaira 187-8502 Japan and;

    Department of Neuropathology Faculty of Medicine University of Tokyo Bunkyo-ku Tokyo 113-0033 Japan;

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