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Common and different genetic background for rheumatoid arthritis and coeliac disease

机译:类风湿关节炎和乳糜泻的共同和不同的遗传背景

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摘要

Recent genome-wide association studies (GWAS) have revealed genetic risk factors in autoimmune and inflammatory disorders. Several of the associated genes and underlying pathways are shared by various autoimmune diseases. Rheumatoid arthritis (RA) and coeliac disease (CD) are two autoimmune disorders which have commonalities in their pathogenesis. We aimed to replicate known RA loci in a Dutch RA population, and to investigate whether the effect of known RA and CD risk factors generalize across the two diseases. We selected all loci associated to either RA or CD in a GWAS and confirmed in an independent cohort, with a combined P-value cut-off P 5 × 10−6. We genotyped 11 RA and 11 CD loci in 1368 RA patients, 795 CD patients and 1683 Dutch controls. We combined our results in a meta-analysis with UK GWAS on RA (1860 cases; 2938 controls) and CD (767 cases; 1422 controls). In the Dutch RA cohort, the PTPN22 and IL2/IL21 variants showed convincing association (P = 3.4 × 10−12 and P = 2.8 × 10−4, respectively). Association of RA with the known CD risk variant in the SH2B3 was also observed, predominantly in the subgroup of rheumatoid factor-positive RA patients (P = 0.0055). In a meta-analysis of Dutch and UK data sets, shared association with six loci (TNFAIP3, IL2/IL21, SH2B3, LPP, MMEL1/TNFRSF14 and PFKFB3/PRKCQ) was observed in both RA and CD cohorts. We confirmed two known loci and identified four novel ones for shared CD–RA genetic risk. Most of the shared loci further emphasize a role for adaptive and innate immunity in these diseases.
机译:最近的全基因组关联研究(GWAS)已揭示了自身免疫和炎性疾病的遗传风险因素。各种自身免疫性疾病共有几种相关基因和潜在途径。类风湿关节炎(RA)和腹腔疾病(CD)是两种自身免疫性疾病,其发病机理具有共性。我们旨在在荷兰的RA人群中复制已知的RA基因座,并研究已知的RA和CD危险因素是否会在这两种疾病中普遍存在。我们在GWAS中选择​​了与RA或CD相关的所有基因座,并在独立队列中进行了确认,并结合了P值截止P <5×10 -6 。我们对1368名RA患者,795名CD患者和1683名荷兰对照组的11个RA和11个CD基因座进行了基因分型。我们将结果与UK GWAS的RA(1860例; 2938例对照)和CD(767例; 1422例)进行了荟萃分析。在荷兰RA队列中,PTPN22和IL2 / IL21变体表现出令人信服的关联性(分别为P = 3.4×10 -12 和P = 2.8×10 -4 )。还观察到RA与SH2B3中已知的CD风险变异有关,主要在类风湿因子阳性RA患者的亚组中(P = 0.0055)。在荷兰和英国数据集的荟萃分析中,在RA和CD队列中均观察到与六个基因座(TNFAIP3,IL2 / IL21,SH2B3,LPP,MMEL1 / TNFRSF14和PFKFB3 / PRKCQ)的共享关联。我们确认了两个已知的基因座,并确定了四个新的基因座,它们具有共同的CD-RA遗传风险。大多数共享基因座进一步强调了这些疾病中适应性免疫和先天免疫的作用。

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