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Identification of Two Novel Mutations of the HOMEZ Gene in Chinese Patients with Isolated Ventricular Septal Defect

机译:中国隔离室间隔缺损患者HOMEZ基因的两个新突变的鉴定。

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摘要

Objectives: Ventricular septal defect (VSD) is the most common congenital heart disease (CHD). Genome-wide linkage analysis revealed a potential CHD susceptibility locus in the homeodomain leucine zipper-encoding (HOMEZ) gene in a South Indian population. The present study aimed to identify potential pathogenic mutations for HOMEZ and to provide insights into the etiology of isolated VSD in the Chinese population. Methods: Case-control mutational analysis was performed in 400 patients with isolated VSD and 400 healthy controls. Protein-coding exton of HOMEZ and their flanking sequences were amplified by polymerase chain reaction and sequenced on an ABI3730 Automated Sequencer. CLC workbench software was used to compare the conservatism of the HOMEZ protein with other multiple species. The ExPASy-ProtScale online tool was used to predicate the alignment of the hydrophobic features. Results: Two novel heterozygous missense mutations (c.116 C>T; c. 630T>A) were identified in HOMEZ gene exon-2. The two mutations lead to alanine to valine substitution at position 39 and serine to arginine at position 210, which are highly conserved among many species. The hydropathicity of the valine and arginine residue at the position 39 and 210 were significantly different from the wild type. Conclusions: We have identified two novel heterozygous missense mutations in HOMEZ gene exon-2 in isolated VSD patients in the Chinese population and have found that these two mutations resulted in alteration of the hydropathicity of the HOMEZ protein. Therefore, the two missense mutations of the HOMEZ gene are directly linked with the etiology of isolated VSD in the Chinese population.
机译:目的:室间隔缺损(VSD)是最常见的先天性心脏病(CHD)。全基因组连锁分析显示南印度人口的同源域亮氨酸拉链编码(HOMEZ)基因中潜在的冠心病易感性位点。本研究旨在确定HOMEZ的潜在致病突变,并为中国人群中分离的VSD的病因提供见解。方法:对400例孤立的VSD患者和400例健康对照者进行病例对照突变分析。通过聚合酶链反应扩增HOMEZ的蛋白质编码外显子及其侧翼序列,并在ABI3730自动测序仪上进行测序。使用CLC工作台软件比较HOMEZ蛋白与其他多种物种的保守性。使用ExPASy-ProtScale在线工具确定疏水特征的对齐方式。结果:在HOMEZ基因外显子2中鉴定出两个新的杂合错义突变(c.116 C> T; c。630T> A)。这两个突变导致在第39位的丙氨酸取代为缬氨酸,在第210位的丝氨酸变为精氨酸,这在许多物种中高度保守。第39和210位的缬氨酸和精氨酸残基的亲水性与野生型显着不同。结论:我们在中国人群中分离出的VSD患者中鉴定出HOMEZ基因exon-2的两个新的杂合错义突变,并发现这两个突变导致HOMEZ蛋白的亲水性改变。因此,HOMEZ基因的两个错义突变与中国人群中分离的VSD的病因直接相关。

著录项

  • 来源
    《Genetic testing and molecular biomarkers》 |2013年第5期|390-394|共5页
  • 作者单位

    TEDA International Cardiovascular Hospital, Medical College, Nankai University, Tianjin, China;

    TEDA International Cardiovascular Hospital, Medical College, Nankai University, Tianjin, China;

    Center for Genetics, National Research Institute for Family Planning, Beijing, China;

    TEDA International Cardiovascular Hospital, Medical College, Nankai University, Tianjin, China;

    TEDA International Cardiovascular Hospital, Medical College, Nankai University, Tianjin, China;

    TEDA International Cardiovascular Hospital, Medical College, Nankai University, Tianjin, China,Department of Medicine & Therapeutics, The Chinese University of Hong Kong, Hong Kong SAR, China;

    TEDA International Cardiovascular Hospital, Medical College, Nankai University, Tianjin, China;

    TEDA International Cardiovascular Hospital, Medical College, Nankai University, Tianjin, China;

    Center for Genetics, National Research Institute for Family Planning, Beijing, China,Center for Genetics National Research Institute for Family Planning No. 12 Dahuisi Road Haidian Beijing 100081 China;

    TEDA International Cardiovascular Hospital, Medical College, Nankai University, Tianjin, China,Department of Surgery, Oregon Health and Science University, Portland, Oregon,TEDA International Cardiovascular Hospital Medical College Nankai University Tianjin 300457 China;

  • 收录信息 美国《科学引文索引》(SCI);美国《化学文摘》(CA);
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

  • 入库时间 2022-08-17 13:17:35

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