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Application of terahertz spectroscopy imaging for discrimination of transgenic rice seeds with chemometrics

机译:太赫兹光谱成像在化学计量学鉴别转基因水稻种子中的应用

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摘要

Discrimination of genetically modified organisms is increasingly demanded by legislation and consumers worldwide. The feasibility of a non-destructive discrimination of transgenic rice seeds from its non-transgenic counterparts was examined by terahertz spectroscopy imaging system combined with chemometrics. Principal component analysis (PCA), least squares support vector machines (LS-SVM), PCA-back propagation neural network (PCA-BPNN), and random forest (RF) models with the first and second derivative and standard normal variate transformation (SNV) pre-treatments were applied to classify rice seeds based on genotype. The results demonstrated that differences between non-transgenic and transgenic rice seeds did exist, and an excellent classification (accuracy was 96.67% in the prediction set) could be achieved using the RF model combined with the first derivative pre-treatment. The results indicated that THz spectroscopy imaging together with chemometrics would be a promising technique to identify transgenic rice seeds with high efficiency and without any sample preparation. (C) 2016 Elsevier Ltd. All rights reserved.
机译:全球立法和消费者越来越要求歧视转基因生物。通过太赫兹光​​谱成像系统结合化学计量学,检验了从其非转基因对应物中无损鉴别转基因水稻种子的可行性。主成分分析(PCA),最小二乘支持向量机(LS-SVM),PCA反向传播神经网络(PCA-BPNN)和具有一阶和二阶导数以及标准正态变量转换(SNV)的随机森林(RF)模型)进行了预处理,根据基因型对水稻种子进行分类。结果表明,非转基因和转基因水稻种子之间确实存在差异,并且使用RF模型与一阶导数预处理相结合可以实现出色的分类(准确度在预测集中为96.67%)。结果表明,太赫兹光谱成像和化学计量学将是一种有前途的技术,无需任何样品前处理即可高效鉴定转基因水稻种子。 (C)2016 Elsevier Ltd.保留所有权利。

著录项

  • 来源
    《Food Chemistry》 |2016年第1期|415-421|共7页
  • 作者单位

    Hefei Univ Technol, Sch Biotechnol & Food Engn, Hefei 230009, Peoples R China|Hefei Univ, Intelligent Control & Compute Vis Lab, Hefei 230601, Peoples R China;

    Hefei Univ Technol, Sch Biotechnol & Food Engn, Hefei 230009, Peoples R China;

    Hefei Univ Technol, Sch Biotechnol & Food Engn, Hefei 230009, Peoples R China;

    Hefei Univ Technol, Sch Biotechnol & Food Engn, Hefei 230009, Peoples R China|Anhui Acad Agr Sci, Rice Res Inst, Hefei 230031, Peoples R China;

    Hefei Univ Technol, Sch Biotechnol & Food Engn, Hefei 230009, Peoples R China|Hefei Univ Technol, Sch Med Engn, Hefei 230009, Peoples R China;

  • 收录信息 美国《科学引文索引》(SCI);美国《生物学医学文摘》(MEDLINE);
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

    Terahertz spectroscopy imaging; Rice seed; Transgenic; Non-destructive determination; Chemometrics;

    机译:太赫兹光谱成像;大米种子;转基因;无损测定;化学计量学;

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