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Development of an optimized multi-biomarker panel for the detection of lung cancer based on principal component analysis and artificial neural network modeling

机译:基于主成分分析和人工神经网络建模的优化的多种生物标志物检测肺癌的开发

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摘要

Lung cancer is a public health priority worldwide due to the high mortality rate and the costs involved. Early detection of lung cancer is important for increasing the survival rate, however, frequently its diagnosis is not made opportunely, since detection methods are not sufficiently sensitive and specific. In recent years serum biomarkers have been proposed as a method that might enhance diagnostic capabilities and complement imaging studies. However, when used alone they show low sensitivity and specificity because lung cancer is a heterogeneous disease. Recent reports have shown that simultaneous analysis of biomarkers has the potential to separate lung cancer patients from control subjects. However, it has become clear that a universal biomarker panel does not exist, and optimized panels need to be developed and validated in each population before their application in a clinical setting. In this study, we selected 14 biomarkers from literature, whose diagnostic or prognostic value had been previously demonstrated for lung cancer, and evaluated them in sera from 63 patients with lung cancer and 87 non-cancer controls (58 Chronic Obstructive Pulmonary Disease (COPD) patients and 29 current smokers). Principal component analysis and artificial neural network modeling allowed us to find a reduced biomarker panel composed of Cyfra 21.1, CEA, CA125 and CRP. This panel was able to correctly classify 135 out of 150 subjects, showing a correct classification rate for lung cancer patients of 88.9%, 93.3% and 90% in training, validation and testing phases, respectively. Thus, sensitivity was increased 18.31% (sensitivity 94.5% at specificity 80%) with respect to the best single marker Cyfra 21.1. This optimized panel represents a potential tool for assisting lung cancer diagnosis, therefore it merits further consideration.
机译:由于高死亡率和所涉及的费用,肺癌已成为全球公共卫生的重点。肺癌的早期检测对于提高生存率很重要,但是,由于检测方法不够灵敏和特异,因此常常无法做出诊断。近年来,已经提出了血清生物标志物作为可以增强诊断能力和补充成像研究的方法。然而,当它们单独使用时,它们显示出较低的敏感性和特异性,因为肺癌是一种异质性疾病。最近的报道表明,同时分析生物标志物有可能将肺癌患者与对照组分开。但是,很明显,不存在通用的生物标志物检测面板,并且需要在每个人群中开发和验证优化的检测面板,然后才能将其应用于临床。在这项研究中,我们从文献中选择了14种生物标志物,这些标志物先前已证明对肺癌具有诊断或预后价值,并在63名肺癌患者和87名非癌性对照患者的血清中进行了评估(58种慢性阻塞性肺疾病(COPD))患者和29位目前的吸烟者)。主成分分析和人工神经网络建模使我们能够找到由Cyfra 21.1,CEA,CA125和CRP组成的生物标志物。该小组能够对150名受试者中的135名进行正确分类,显示在训练,验证和测试阶段对肺癌患者的正确分类率分别为88.9%,93.3%和90%。因此,相对于最佳单一标记Cyfra 21.1,灵敏度提高了18.31%(特异性为80%时灵敏度为94.5%)。该优化的面板代表了辅助肺癌诊断的潜在工具,因此值得进一步考虑。

著录项

  • 来源
    《Expert systems with applications》 |2012年第12期|p.10851-10856|共6页
  • 作者单位

    Centra de Investigation y Asistencia en Tecnologia y Diseno del Estado de Jalisco, AC, Av. Normalistas 800, C.P. 44270 Guadalajara, Jalisco, Mexico;

    Centra de Investigation y Asistencia en Tecnologia y Diseno del Estado de Jalisco, AC, Av. Normalistas 800, C.P. 44270 Guadalajara, Jalisco, Mexico;

    OPD Antiguo Hospital Civil de Guadalajara 'Fray Antonio Alcalde', Servicio de Fisiologia Pulmonar e Inhaloterapia, Hospital 278, C.P. 44280 Guadalajara, Jalisco, Mexico;

    Coordination de Oncologia Medico, Centra Oncologico Estatal ISSEMYM, Avenida Solidaridad las Torres 101, C.P. 50180 Toluca, Estado de Mexico, Mexico;

    Coordination de Oncologia Medico, Centra Oncologico Estatal ISSEMYM, Avenida Solidaridad las Torres 101, C.P. 50180 Toluca, Estado de Mexico, Mexico;

    Centra de Investigation y Asistencia en Tecnologia y Diseno del Estado de Jalisco, AC, Av. Normalistas 800, C.P. 44270 Guadalajara, Jalisco, Mexico;

    Centra de Investigation y Asistencia en Tecnologia y Diseno del Estado de Jalisco, AC, Av. Normalistas 800, C.P. 44270 Guadalajara, Jalisco, Mexico;

    Division de Matematicas Aplicadas, WICyT, Camino a la presa San Jose 2055, Lamas 4a Secc, C.P. 78216 San Luis Potosi, Mexico CIATEJ, AC. Av. Normalistas 800, Col. Colinas de la Normal, C.P. 44270, Guadalajara, Jalisco, Mexico;

    Centra de Investigation y Asistencia en Tecnologia y Diseno del Estado de Jalisco, AC, Av. Normalistas 800, C.P. 44270 Guadalajara, Jalisco, Mexico;

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  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

    biomarkers; artificial neural network; principal component analysis; diagnosis; lung cancer;

    机译:生物标志物人工神经网络;主成分分析诊断;肺癌;

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