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首页> 外文期刊>Environmental research >Predicting cytotoxicity of complex mixtures in high cancer incidence regions of the Huai River Basin based on GC-MS spectrum with partial least squares regression
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Predicting cytotoxicity of complex mixtures in high cancer incidence regions of the Huai River Basin based on GC-MS spectrum with partial least squares regression

机译:基于偏最小二乘回归的GC-MS光谱预测淮河流域高发地区复杂混合物的细胞毒性

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摘要

Complex mixture exposures, such as those associated with water sources, are an important issue in health risk assessment. This study assessed the cytotoxicity of chemical mixtures extracted from water sources in regions of the Huai River Basin with high cancer incidences and built statistical models of cytotoxicity based on pollution profiles that were measured with gas chromatography-mass spectro-metry (GC-MS). Both surface and ground waters were collected from rural water sources of Shenqiu County, Henan Province of China from 2008 to 2011 and extracted with XAD-2 resigns. Cytotoxicity was evaluated with Chinese hamster ovary K1 (CHO-K1) cells and compared against the pollution profiles of the extracts. IC_(50) of water samples ranged from 0.023 to 0.338 L-eq/mL. The pollutants in waters determined by GC-MS are complex and some of the compounds that contributed to cytotoxicity lack toxicity data. A partial least squares (PLS) regression model of cytotoxicity was built based on linear aggregation of predictor variables (i.e., peaks for single compounds in the gas chromatograms). The PLS model contains 2 PLS factors extracted from 141 variables. The model was validated internally with training data permutation and externally with a test sample. The model explained 92% of the cytotoxicity in the training samples and 40% in the test sample. This approach provides a general, rapid method for relating water toxicity to GC-MS chromatograms and for predicting the compounds that contribute most to toxicity.
机译:复杂的混合物暴露(例如与水有关的暴露)是健康风险评估中的重要问题。这项研究评估了淮河流域癌症高发地区从水源中提取的化学混合物的细胞毒性,并基于用气相色谱-质谱法(GC-MS)测量的污染概况建立了细胞毒性统计模型。从2008年至2011年,从中国河南省沉丘县的农村水源收集地表水和地下水,并用XAD-2标牌提取。用中国仓鼠卵巢K1(CHO-K1)细胞评估了细胞毒性,并与提取物的污染状况进行了比较。水样的IC_(50)范围为0.023至0.338 Leqeq / mL。通过GC-MS测定的水中污染物是复杂的,某些导致细胞毒性的化合物缺乏毒性数据。基于预测变量(即气相色谱图中单个化合物的峰)的线性聚集,建立了细胞毒性的偏最小二乘(PLS)回归模型。 PLS模型包含从141个变量中提取的2个PLS因子。该模型在内部通过训练数据排列进行了验证,在外部通过测试样本进行了验证。该模型解释了训练样品中92%的细胞毒性和测试样品中40%的细胞毒性。这种方法提供了一种通用的快速方法,可将水毒性与GC-MS色谱图联系起来,并预测对毒性有最大贡献的化合物。

著录项

  • 来源
    《Environmental research》 |2015年第2期|391-397|共7页
  • 作者单位

    Key Laboratory of Public Health and Safety, Ministry of Education, Department of Environmental Health, School of Public Health, Fudan University, Yi Xue Yuan Road 138, Shanghai 200032, China;

    Key Laboratory of Public Health and Safety, Ministry of Education, Department of Environmental Health, School of Public Health, Fudan University, Yi Xue Yuan Road 138, Shanghai 200032, China;

    Key Laboratory of the Public Health Safety, Ministry of Education, Department of Nutrition and Food Hygiene, Fudan University, Shanghai 200032, China;

    Chinese Center for Disease Control and Prevention, Nan Wei Road 29, Beijing 100050, China;

    Institute for Chemical Safety Sciences, The Hamner Institutes for Health Sciences, Research Triangle Park, NC 27709, USA;

    Key Laboratory of the Public Health Safety, Ministry of Education, Department of Childhood and Adolescent, Fudan University, Shanghai 200032, China;

    Key Laboratory of Public Health and Safety, Ministry of Education, Department of Environmental Health, School of Public Health, Fudan University, Yi Xue Yuan Road 138, Shanghai 200032, China;

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  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

    Cytotoxicity; Mixture toxicology; Partial least squares; Regression; Water;

    机译:细胞毒性;混合物毒理学;偏最小二乘;回归;水;

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