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iTRAQ-based quantitative proteomic analysis reveals important metabolic pathways for arsenic-induced liver fibrosis in rats

机译:基于iTRAQ的定量蛋白质组学分析揭示了砷诱导的大鼠肝纤维化的重要代谢途径

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Long-term consumption of sodium arsenite contaminated water can cause endemic arsenic disease. The proteome profile changes of liver fibrosis after exposure to arsenite containing water remain unclear. In this study, Sprague-Dawley (SD) male rats were treated with sodium arsenite (iAs3+), using a daily dose of 1.36?mg/kg body weight (medium dose group, M), 2.73?mg/kg body weight (high dose group, H) or deionized water (control group, C). Isobaric tags for relative and absolute quantitation (iTRAQ) were used to identify the different abundant proteins (DAPs) after arsenic-induced liver fibrosis. A total of 2987 high-quality proteins were detected (95% confident peptides?≥?2), 608 of which were differentially expressed (fold change??2 and p??0.05) in M group and 475 in H group. Moreover, 431 DAPs were found in both M and H groups and used in subsequent bioinformatic analyses. Gene ontology (GO) analysis revealed 4,709 GO terms could be mapped, among which purine binding, actin filament binding and protein kinase binding were the most enriched terms for molecular function category. In addition, protein-protein interaction analysis showed six clusters of interaction networks. Our data provided new insights into the proteome changes after arsenic-induced liver fibrosis in model rats.
机译:长期饮用亚砷酸钠污染的水可能导致地方性砷病。暴露于含砷的水中后,肝纤维化的蛋白质组特征变化仍然不清楚。在这项研究中,使用亚砷酸钠(iAs3 +)处理Sprague-Dawley(SD)雄性大鼠,日剂量为1.36?mg / kg体重(中剂量组,M),2.73?mg / kg体重(高剂量组,H)或去离子水(对照组,C)。相对定量和绝对定量的等压标签(iTRAQ)用于鉴定砷诱导的肝纤维化后不同的丰富蛋白质(DAP)。在M组中共检测到2987种高质量蛋白质(95%可信肽≥2),其中在M组中有608种差异表达(倍数变化≥2,p≤0.05)。此外,在M和H组中均发现431个DAP,并将其用于后续的生物信息学分析。基因本体论(GO)分析显示,可以映射4,709个GO术语,其中嘌呤结合,肌动蛋白丝结合和蛋白激酶结合是分子功能类别中最丰富的术语。此外,蛋白质-蛋白质相互作用分析显示了六个相互作用网络簇。我们的数据为砷诱导的大鼠肝纤维化后蛋白质组变化提供了新的见解。

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