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首页> 外文期刊>Journal of Clinical Microbiology >Sensitivity of the ISO 6579:2002/Amd 1:2007 Standard Method for Detection of Salmonella spp. on Mesenteric Lymph Nodes from Slaughter Pigs
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Sensitivity of the ISO 6579:2002/Amd 1:2007 Standard Method for Detection of Salmonella spp. on Mesenteric Lymph Nodes from Slaughter Pigs

机译:ISO 6579:2002 / Amd 1:2007沙门氏菌属检测标准方法的灵敏度。猪的肠系膜淋巴结转移

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摘要

The ISO 6579:2002/Amd 1:2007 (ISO) standard has been the bacteriological standard method used in the European Union for the detection of Salmonella spp. in pig mesenteric lymph nodes (MLN), but there are no published estimates of the diagnostic sensitivity (Se) of the method in this matrix. Here, the Se of the ISO (SeISO) was estimated on 675 samples selected from two populations with different Salmonella prevalences (14 farms with a ≥20% prevalence and 13 farms with a <20% prevalence) and through the use of latent-class models in concert with Bayesian inference, assuming 100% ISO specificity, and an invA-based PCR as the second diagnostic method. The SeISO was estimated to be close to 87%, while the sensitivity of the PCR reached up to 83.6% and its specificity was 97.4%. Interestingly, the bacteriological reanalysis of 33 potential false-negative (PCR-positive) samples allowed isolation of 19 (57.5%) new Salmonella strains, improving the overall diagnostic accuracy of the bacteriology. Considering the usual limitations of bacteriology regarding Se, these results support the adequacy of the ISO for the detection of Salmonella spp. from MLN and also that of the PCR-based method as an alternative or complementary (screening) test for the diagnosis of pig salmonellosis, particularly considering the cost and time benefits of the molecular procedure.
机译:ISO 6579:2002 / Amd 1:2007(ISO)标准已成为欧盟用于检测沙门氏菌属的细菌标准方法。在猪肠系膜淋巴结(MLN)中,但是在该矩阵中尚无该方法的诊断敏感性(Se)的公开估计。在此,ISO硒(Se ISO )的硒是从沙门氏菌患病率不同的两个种群中选择的675个样本中估计的(14个养殖场≥20%的养殖场和13个养殖场<20%的患病率)并通过使用潜在类模型与贝叶斯推论相结合,假设100%ISO特异性,并使用基于 invA 的PCR作为第二种诊断方法。 Se ISO 估计接近87%,而PCR的灵敏度高达83.6%,其特异性为97.4%。有趣的是,对33种潜在的假阴性(PCR阳性)样品进行细菌学重新分析,可以分离出19株(57.5%)新的沙门氏菌菌株,从而提高了细菌学的总体诊断准确性。考虑到有关硒的细菌学通常的局限性,这些结果证明了ISO对沙门氏菌属的检测是足够的。 MLN的方法,以及基于PCR的方法作为猪沙门氏菌病诊断的替代或补充(筛查)方法,特别是考虑分子程序的成本和时间收益。

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