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Sensitivity of the ISO 6579:2002/Amd 1:2007 Standard Method for Detection of Salmonella spp. on Mesenteric Lymph Nodes from Slaughter Pigs

机译:ISO 6579:2002 / Amd 1:2007检测沙门氏菌属的标准方法的灵敏度。猪的肠系膜淋巴结转移

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摘要

The ISO 6579:2002/Amd 1:2007 (ISO) standard has been the bacteriological standard method used in the European Union for the detection of Salmonella spp. in pig mesenteric lymph nodes (MLN), but there are no published estimates of the diagnostic sensitivity (Se) of the method in this matrix. Here, the Se of the ISO (SeISO) was estimated on 675 samples selected from two populations with different Salmonella prevalences (14 farms with a ≥20% prevalence and 13 farms with a <20% prevalence) and through the use of latent-class models in concert with Bayesian inference, assuming 100% ISO specificity, and an invA-based PCR as the second diagnostic method. The SeISO was estimated to be close to 87%, while the sensitivity of the PCR reached up to 83.6% and its specificity was 97.4%. Interestingly, the bacteriological reanalysis of 33 potential false-negative (PCR-positive) samples allowed isolation of 19 (57.5%) new Salmonella strains, improving the overall diagnostic accuracy of the bacteriology. Considering the usual limitations of bacteriology regarding Se, these results support the adequacy of the ISO for the detection of Salmonella spp. from MLN and also that of the PCR-based method as an alternative or complementary (screening) test for the diagnosis of pig salmonellosis, particularly considering the cost and time benefits of the molecular procedure.
机译:ISO 6579:2002 / Amd 1:2007(ISO)标准已成为欧盟用于检测沙门氏菌属的细菌标准方法。在猪肠系膜淋巴结(MLN)中,但是在该矩阵中尚无该方法的诊断敏感性(Se)的公开估计。在这里,ISO的硒(SeISO)是从675个样本中估算出来的,这些样本选自沙门氏菌患病率不同的两个人群(14个患病率≥20%的农场和13个患病率<20%的农场),并且使用了潜在类别该模型与贝叶斯推论一致,假定100%ISO特异性,并且基于invA的PCR作为第二种诊断方法。 SeISO估计接近87%,而PCR的灵敏度高达83.6%,其特异性为97.4%。有趣的是,对33种潜在的假阴性(PCR阳性)样品进行细菌学重新分析后,可以分离出19株(57.5%)新的沙门氏菌菌株,从而提高了细菌学的总体诊断准确性。考虑到有关硒的细菌学通常的局限性,这些结果支持了ISO对沙门氏菌属检测的充分性。 MLN的检测方法以及基于PCR的方法作为诊断或鉴定猪沙门氏菌病的替代或补充(筛选)方法,特别是考虑了分子操作的成本和时间效益。

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