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Robustness and filtering properties of ubiquitous signaling network motifs

机译:普遍存在的信号网络模体的鲁棒性和滤波特性

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Abstract: Biological systems are intrinsically robust. The system, being an open one, is permanently exposed to perturbations due to external noise from the surrounding environment. In this context, the architecture and information processing capabilities of a signaling network play an important role in attenuating the noise. Multi-layered phosphorylation cascades are architectures prevalent in some of our major signaling pathways. In this work, we investigate the robustness of such signaling cascades with respect to external input variations. We employ local sensitivity and output-variance based sensitivity as measures of robustness for such cascades and observe that the efficiency of high frequency signal attenuation increases with the number of in the cascades. Filtering properties of cascades have been observed previously but not under a very rigorous theoretical framework and not in comparison with other models. This work provides an example of optimality versus robustness tradeoff in the design principles of biological systems.
机译:摘要:生物系统具有内在的鲁棒性。该系统是开放式系统,由于周围环境的外部噪声而永久性地受到干扰。在这种情况下,信令网络的架构和信息处理能力在衰减噪声方面起着重要作用。多层磷酸化级联反应是一些主要信号通路中普遍存在的结构。在这项工作中,我们调查了这种信号级联相对于外部输入变化的鲁棒性。我们采用局部灵敏度和基于输出方差的灵敏度作为此类级联的鲁棒性度量,并观察到高频信号衰减的效率随级联数量的增加而增加。之前已经观察到了级联的过滤特性,但是没有在非常严格的理论框架下进行,也没有与其他模型进行比较。这项工作提供了生物系统设计原理中最优性与鲁棒性权衡的示例。

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