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Characterization of a Novel Metagenome-Derived 6-Phospho-β-Glucosidase from Black Liquor Sediment

机译:黑酒沉积物中新型代谢组学衍生的6-磷酸-β-葡萄糖苷酶的表征

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摘要

The enzyme 6-phospho-β-glucosidase is an important member of the glycoside hydrolase family 1 (GH1). However, its catalytic mechanisms, especially the key residues determining substrate specificity and affinity, are poorly understood. A metagenome-derived gene sequence, encoding a novel 6-phospho-β-glucosidase designated Pbgl25-217, was isolated and characterized. The optimal conditions for enzymatic activity were 37°C and pH 7; Ca2+, Mg2+, and Mn2+ stabilized the activity of Pbgl25-217, whereas Ni2+, Fe2+, Zn2+, Cu2+, and Fe3+ inhibited its activity. The Km and Vmax of Pbgl25-217 were 4.8 mM and 1,987.0 U mg?1, respectively. Seven conserved residues were recognized by multiple alignments and were tested by site-directed mutagenesis for their functions in substrate recognition and catalytic reaction. The results suggest that residues S427, Lys435, and Tyr437 act as “gatekeepers” in a phosphate-binding loop and play important roles in phosphate recognition. This functional identification may provide insights into the specificity of 6-phospho-β-glycosidases in GH1 and be useful for designing further directed evolution.
机译:6-磷酸-β-葡萄糖苷酶是糖苷水解酶家族1(GH1)的重要成员。然而,人们对其催化机制,尤其是决定底物特异性和亲和力的关键残基的了解甚少。分离并鉴定了一个由元基因组衍生的基因序列,该序列编码名为Pbgl25-217的新型6-磷酸-β-葡萄糖苷酶。酶促活性的最佳条件是37°C和pH 7。 Ca2 +,Mg2 +和Mn2 +稳定了Pbgl25-217的活性,而Ni2 +,Fe2 +,Zn2 +,Cu2 +和Fe3 +抑制了其活性。 Pbgl25-217的Km和Vmax分别为4.8mM和1,987.0U mg·1。通过多重比对识别了七个保守残基,并通过定点诱变测试了它们在底物识别和催化反应中的功能。结果表明,残基S427,Lys435和Tyr437在磷酸盐结合环中充当“守门人”,并在磷酸盐识别中起重要作用。这种功能鉴定可提供对GH1中6-磷酸-β-糖苷酶特异性的深入了解,并有助于设计进一步的定向进化。

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