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Rapid detection of the common avian leukosis virus subgroups by real-time loop-mediated isothermal amplification

机译:实时环介导的等温扩增快速检测常见的禽白血病病毒亚组

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Subgroups A, B, E and J are the major subgroups of avian leukosis virus (ALV) infecting chickens. ALV infection has become endemic in China and has a significant negative effect on the poultry industry. Consequently, there is an urgent need for a specific, sensitive and rapid method for diagnosis and eradication of ALV. Therefore, we developed a simple and rapid real-time loop-mediated isothermal amplification (LAMP) reaction for the timely detection of the common ALV subgroups, whereby the amplification can be obtained in 35?min under isothermal conditions at 63?°C, ability to specific, sensitive and rapid detect all the common ALV subgroups. A set of four specific primers was designed to target the sequences of the pol gene of ALV, and the loop-mediated isothermal amplification (LAMP) assay were developed and compared with PCR and virus isolation methods. The results from specificity of the LAMP assay showed that only target ALVs DNA was amplified. The LAMP assay demonstrated a sensitivity of 20 copies/reaction of ALV DNA, which was 10 times higher than the conventional PCR measurement. To further evaluate the reliability of the method, the assay was evaluated with ALV DNA from a panel of 81 clinical samples suspected of ALV infection. The results verify that the LAMP method was more sensitive than the conventional PCR and virus isolation method. In conclusion, the developed LAMP assay was a simple, inexpensive, sensitive method for the rapid detection of the most common subgroups of ALV, and it provided a useful and practical tool in the eradication program for ALV in the poultry industry.
机译:A,B,E和J亚组是感染鸡的禽白血病病毒(ALV)的主要亚组。 ALV感染在中国已成为地方病,对家禽业产生重大负面影响。因此,迫切需要一种用于诊断和根除ALV的特异性,灵敏和快速的方法。因此,我们开发了一种简单,快速的实时环介导的等温扩增(LAMP)反应,用于及时检测常见的ALV亚组,从而可以在63?C的等温条件下于35?min的时间内完成扩增。以特定,敏感和快速的方式检测所有常见的ALV亚组。设计了一套针对ALV pol基因序列的四种特异性引物,并开发了环介​​导的等温扩增(LAMP)分析,并将其与PCR和病毒分离方法进行了比较。 LAMP分析的特异性结果表明,仅扩增了目标ALVs DNA。 LAMP分析显示ALV DNA /反应的灵敏度为20拷贝/反应,比常规PCR测量高10倍。为了进一步评估该方法的可靠性,使用来自81个疑似ALV感染临床样本的ALV DNA评估了该测定方法。结果证明,LAMP方法比常规PCR和病毒分离方法更灵敏。总之,开发的LAMP测定法是一种用于快速检测ALV最常见亚组的简单,廉价,灵敏的方法,它为家禽业的ALV根除计划提供了有用且实用的工具。

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