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A case–control genome-wide association study of ADHD discovers a novel association with the tenascin R ( TNR ) gene

机译:多动症的病例对照全基因组关联研究发现与腱糖蛋白R(TNR)基因的新型关联

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It is well-established that there is a strong genetic contribution to the aetiology of attention deficit hyperactivity disorder (ADHD). Here, we employed a hypothesis-free genome-wide association study (GWAS) design in a sample of 480 clinical childhood ADHD cases and 1208 controls to search for novel genetic risk loci for ADHD. DNA was genotyped using Illumina’s Human Infinium PsychArray-24v1.2., and the data were subsequently imputed to the 1000 Genomes reference panel. Rigorous quality control and pruning of genotypes at both individual subject and single nucleotide polymorphism (SNP) levels was performed. Polygenic risk score (PGRS) analysis revealed that ADHD case–control status was explained by genetic risk for ADHD, but no other major psychiatric disorders. Logistic regression analysis was performed genome-wide to test the association between SNPs and ADHD case–control status. We observed a genome-wide significant association (p?=?3.15E?08) between ADHD and rs6686722, mapped to the Tenascin R (TNR) gene. Members of this gene family are extracellular matrix glycoproteins that play a role in neural cell adhesion and neurite outgrowth. Suggestive evidence of associations with ADHD was observed for an additional 111 SNPs (?9.91E?05). Although intriguing, the association between DNA variation in the TNR gene and ADHD should be viewed as preliminary given the small sample size of this discovery dataset.
机译:公认的是,注意力缺陷多动障碍(ADHD)的病因有很强的遗传学贡献。在这里,我们在480例儿童ADHD临床病例和1208例对照样本中采用了无假设的全基因组关联研究(GWAS)设计,以寻找ADHD的新型遗传风险基因座。使用Illumina的Human Infinium PsychArray-24v1.2。对DNA进行基因分型,然后将数据推算到1000个基因组参考面板中。在个体受试者和单核苷酸多态性(SNP)水平上均进行严格的质量控制和基因型修剪。多基因风险评分(PGRS)分析显示,ADHD的病例对照状态可以通过ADHD的遗传风险来解释,但没有其他主要的精神疾病。在全基因组范围内进行逻辑回归分析,以检验SNP与ADHD病例对照状态之间的关联。我们观察到ADHD与rs6686722之间在全基因组范围内的显着关联(p?=?3.15E?08),该关联定位于腱生蛋白R(TNR)基因。该基因家族的成员是细胞外基质糖蛋白,在神经细胞粘附和神经突生长中起作用。观察到与ADHD相关的提示性证据为另外111个SNP(?9.91E?05)。尽管很有趣,但鉴于此发现数据集的样本量较小,TNR基因中的DNA变异与ADHD之间的关联应被视为是初步的。

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