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Optimal Sampling Strategies for Detecting Zoonotic Disease Epidemics

机译:检测人畜共患病疫情的最佳抽样策略

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The early detection of disease epidemics reduces the chance of successful introductions into new locales, minimizes the number of infections, and reduces the financial impact. We develop a framework to determine the optimal sampling strategy for disease detection in zoonotic host-vector epidemiological systems when a disease goes from below detectable levels to an epidemic. We find that if the time of disease introduction is known then the optimal sampling strategy can switch abruptly between sampling only from the vector population to sampling only from the host population. We also construct time-independent optimal sampling strategies when conducting periodic sampling that can involve sampling both the host and the vector populations simultaneously. Both time-dependent and -independent solutions can be useful for sampling design, depending on whether the time of introduction of the disease is known or not. We illustrate the approach with West Nile virus, a globally-spreading zoonotic arbovirus. Though our analytical results are based on a linearization of the dynamical systems, the sampling rules appear robust over a wide range of parameter space when compared to nonlinear simulation models. Our results suggest some simple rules that can be used by practitioners when developing surveillance programs. These rules require knowledge of transition rates between epidemiological compartments, which population was initially infected, and of the cost per sample for serological tests.
机译:及早发现疾病流行病会减少成功地将其引入新地区的机会,将感染数量降至最低,并降低财务影响。当疾病从可检测的水平以下降至流行病时,我们开发了一个框架来确定在人畜共患病宿主病毒流行病学系统中检测疾病的最佳采样策略。我们发现,如果已知疾病引入的时间,则最佳采样策略可以在仅从媒介种群采样到仅从宿主种群采样之间突然切换。在进行可能涉及同时采样宿主和载体种群的周期性采样时,我们还构建了与时间无关的最佳采样策略。与时间有关和与时间无关的解决方案均可用于抽样设计,这取决于疾病的引入时间是否已知。我们用西尼罗河病毒(一种全球传播的人畜共患虫病毒)说明了这种方法。尽管我们的分析结果基于动力学系统的线性化,但与非线性仿真模型相比,采样规则在很大范围的参数空间上似乎都很健壮。我们的结果提出了一些简单的规则,从业人员可以在制定监视计划时使用它们。这些规则要求了解流行病区隔之间的转移率(最初感染的人群)以及血清学检测每个样品的成本。

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