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In vitro and in silico multidimensional modeling of oncolytic tumor virotherapy dynamics

机译:溶瘤肿瘤病毒治疗动力学的体外和计算机模拟多维模型

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Author summary Tumor therapy with replicating oncolytic viruses is based on the premise that if the tumor specific virus infects and is amplified by the tumor population and spreads sufficiently within the tumor, it will lead to eradication of the cancer. The outcome of this approach is an exercise in population dynamics, and, as in ecology, depends on the detailed interactions between the various players involved. Mathematical models have been used to capture these dynamics, but space is often explicitly excluded from these models. We combine in vitro experiments studying tumor growth and virus spread in two and three dimensions to inform the development of a spatially explicit computational model of tumor virotherapy and compare the outcome with non-spatial, mean-field models. Viruses generally spread from cell to cell, and therefore the number of nearest neighbors close to an infected cell is important. Experimental data show that in three dimensions, the median number of nearest neighbors is 16 compared to 6 in the 2D plane. However, while simulations in 3D reach equilibrium faster than in 2D, tumor eradication is much less common in 3D than in 2D. Three dimensional space plays a critical role in the outcome of tumor virotherapy and this additional spatial dimension cannot be ignored in modeling.
机译:作者总结用溶瘤病毒复制进行肿瘤治疗的前提是,如果肿瘤特异性病毒感染并由肿瘤群体扩增并在肿瘤内充分扩散,它将导致癌症的根除。这种方法的结果是在人口动态中进行演习,并且像在生态学中一样,取决于所涉各个参与者之间的详细互动。数学模型已用于捕获这些动力学,但是空间通常被明确排除在这些模型之外。我们结合在二维和三维中研究肿瘤生长和病毒传播的体外实验,以告知肿瘤病毒治疗的空间明确计算模型的发展,并将结果与​​非空间均值模型进行比较。病毒通常在细胞之间传播,因此靠近被感染细胞的最近邻居数量很重要。实验数据显示,在3维中,最近邻居的中位数为16,而在2D平面中为6。但是,虽然3D中的模拟达到平衡的速度比2D中的模拟快,但是3D中的肿瘤根除要比2D中的少得多。三维空间在肿瘤病毒治疗的结果中起着至关重要的作用,这种额外的空间维度在建模中不可忽略。

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