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首页> 外文期刊>Mitochondrial DNA Part B >Complete chloroplast genome sequence of Carpinus oblongifolia (Betulaceae) and phylogenetic analysis
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Complete chloroplast genome sequence of Carpinus oblongifolia (Betulaceae) and phylogenetic analysis

机译:欧冠锦鲤叶绿体全基因组序列分析及系统发育分析

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Carpinus oblongifolia (Betulaceae) is a critically endangered species endemic to Jiangsu. In this study, the complete chloroplast (cp) genome of C. oblongifolia was assembled based on next-generation sequencing. The cp genome was 159,086?bp in length, including a large single-copy (LSC) region of 88,190?bp, a small single-copy (SSC) region of 18,765?bp and a pair of inverted repeats (IRs) of 26,066 and 26,067?bp, respectively. The genome contained 124 genes, including 85 protein-coding genes, 30 tRNA genes, and 8 ribosomal RNA genes. The overall GC content of the chloroplast genome was 36.49%. A phylogenetic analysis demonstrated a close relationship between C. oblongifolia and Ostrya rehderiana .
机译:长叶锦鸡儿(Betulaceae)是江苏特有的极度濒危物种。在这项研究中,C的完整叶绿体(cp)基因组。椭圆叶是基于下一代测序而组装的。 cp基因组的长度为159,086?bp,包括一个88,190?bp的大单拷贝(LSC)区,一个18,765?bp的小单拷贝(SSC)区和一对26,066的反向重复序列(IR)。分别为26,067?bp。基因组包含124个基因,其中包括85个蛋白质编码基因,30个tRNA基因和8个核糖体RNA基因。叶绿体基因组的总GC含量为36.49%。系统发育分析表明,iC之间存在密切关系。 oblongifolia和 Ostrya rehderiana。

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