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Metastable Intermediates as Stepping Stones on the Maturation Pathways of Viral Capsids

机译:亚稳态中间体作为病毒衣壳成熟途径的垫脚石

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As they mature, many capsids undergo massive conformational changes that transform their stability, reactivity, and capacity for DNA. In some cases, maturation proceeds via one or more intermediate states. These structures represent local minima in a rich energy landscape that combines contributions from subunit folding, association of subunits into capsomers, and intercapsomer interactions. We have used scanning calorimetry and cryo-electron microscopy to explore the range of capsid conformations accessible to bacteriophage HK97. To separate conformational effects from those associated with covalent cross-linking (a stabilization mechanism of HK97), a cross-link-incompetent mutant was used. The mature capsid Head I undergoes an endothermic phase transition at 60°C in which it shrinks by 7%, primarily through changes in its hexamer conformation. The transition is reversible, with a half-life of ~3?min; however, >50% of reverted capsids are severely distorted or ruptured. This observation implies that such damage is a potential hazard of large-scale structural changes such as those involved in maturation. Assuming that the risk is lower for smaller changes, this suggests a rationalization for the existence of metastable intermediates: that they serve as stepping stones that preserve capsid integrity as it switches between the radically different conformations of its precursor and mature states. >IMPORTANCE Large-scale conformational changes are widespread in virus maturation and infection processes. These changes are accompanied by the release of conformational free energy as the virion (or fusogenic glycoprotein) switches from a precursor state to its mature state. Each state corresponds to a local minimum in an energy landscape. The conformational changes in capsid maturation are so radical that the question arises of how maturing capsids avoid being torn apart. Offering proof of principle, severe damage is inflicted when a bacteriophage HK97 capsid reverts from the (nonphysiological) state that it enters when heated past 60°C. We suggest that capsid proteins have been selected in part by the criterion of being able to avoid sustaining collateral damage as they mature. One way of achieving this—as with the HK97 capsid—involves breaking the overall transition down into several smaller steps in which the risk of damage is reduced.
机译:随着它们的成熟,许多衣壳经历了巨大的构象变化,从而改变了它们的稳定性,反应性和DNA能力。在某些情况下,成熟通过一种或多种中间状态进行。这些结构代表了丰富的能源景观中的局部极小值,其结合了来自亚基折叠,亚基缔合成衣壳异构体以及衣壳间相互作用的贡献。我们已经使用扫描量热法和冷冻电子显微镜研究了噬菌体HK97可进入的衣壳构象范围。为了将构象效应与共价交联相关的构象效应(HK97的稳定机制)分开,使用了无交联能力的突变体。成熟的衣壳蛋白Head I在60°C时经历吸热相变,在其中它收缩7%(主要是通过六聚体构象的变化)。过渡是可逆的,半衰期为〜3?min。但是,超过50%的衣壳被严重扭曲或破裂。该观察结果表明,这种损坏是大规模结构变化(例如那些涉及成熟的结构变化)的潜在危害。假设较小变化的风险较低,这表明存在亚稳中间体的合理化:当其在前体和成熟状态的根本不同构象之间切换时,它们充当保持衣壳完整性的垫脚石。 >重要性:大规模构象变化在病毒成熟和感染过程中十分普遍。这些变化伴随着病毒体(或融合糖蛋白)从前体状态转变为成熟状态时释放的构象自由能。每个状态对应于能源格局中的局部最小值。衣壳成熟的构象变化是如此剧烈,以至于出现了如何避免衣壳成熟的问题。提供原理的证明,当噬菌体HK97衣壳从加热到60°C以上时进入的(非生理)状态恢复时,会造成严重损害。我们建议衣壳蛋白的选择是根据能够避免它们成熟时持续遭受附带损害的标准选择的。实现这一目标的一种方法(例如使用HK97衣壳)涉及将整个过渡过程分解为几个较小的步骤,以减少损坏的风险。

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