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Comparative genomic analysis of two brucellaphages of distant origins

机译:两种远缘布鲁氏菌的比较基因组分析

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Here, we present the first complete genome sequence of brucellaphage Tbilisi (Tb) and compared it with that of Pr, a broad host-range brucellaphage recently isolated in Mexico. The genomes consist of 41,148?bp (Tb) and 38,253?bp (Pr), they differ mainly in the region encoding structural proteins, in which the genome of Tb shows two major insertions. Both genomes share 99.87% nucleotide identity, a high percentage of identity among phages isolated at so globally distant locations and temporally different occasions. Sequence analysis revealed 57 conserved ORFs, three transcriptional terminators and four putative transcriptional promoters. The co-occurrence of an ORF encoding a putative DnaA-like protein and a putative oriC-like origin of replication was found in both brucellaphages genomes, a feature not described in any other phage genome. These elements suggest that DNA replication in brucellaphages differs from other phages, and might resemble that of bacterial chromosomes.
机译:在这里,我们介绍了布鲁氏噬菌体第比利斯(Tb)的第一个完整基因组序列,并将其与最近在墨西哥分离出的广泛宿主范围布鲁氏噬菌体Pr进行了比较。基因组由41148?bp(Tb)和38253?bp(Pr)组成,它们的主要区别在于编码结构蛋白的区域,其中Tb的基因组显示出两个主要插入。这两个基因组共有99.87%的核苷酸同一性,在如此遥远的全球范围和不同的时间分离的噬菌体中具有很高的同一性。序列分析揭示了57个保守的ORF,三个转录终止子和四个推定的转录启动子。在两个布鲁氏噬菌体基因组中都发现了编码假定的DnaA样蛋白和假定的oriC样复制起点的ORF的同时存在,这一特征在任何其他噬菌体基因组中均未描述。这些元素表明布鲁氏菌噬菌体中的DNA复制不同于其他噬菌体,并且可能类似于细菌染色体。

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