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首页> 外文期刊>Eukaryotic cell >Toxoplasma gondii Asexual Development: Identification of Developmentally Regulated Genes and Distinct Patterns of Gene Expression
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Toxoplasma gondii Asexual Development: Identification of Developmentally Regulated Genes and Distinct Patterns of Gene Expression

机译:弓形虫无性发育:发育调控的基因和基因表达的不同模式的鉴定。

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Asexual development in Toxoplasma gondii is a vital aspect of the parasite's life cycle, allowing transmission and avoidance of the host immune response. Differentiation of rapidly dividing tachyzoites into slowly growing, encysted bradyzoites involves significant changes in both physiology and morphology. We generated microarrays of ~4,400 Toxoplasma cDNAs, representing a minimum of ~600 genes (based on partial sequencing), and used these microarrays to study changes in transcript levels during tachyzoite-to-bradyzoite differentiation. This approach has allowed us to (i) determine expression profiles of previously described developmentally regulated genes, (ii) identify novel developmentally regulated genes, and (iii) identify distinct classes of genes based on the timing and magnitude of changes in transcript levels. Whereas microarray analysis typically involves comparisons of mRNA levels at different time points, we have developed a method to measure relative transcript abundance between genes at a given time point. This method was used to determine transcript levels in parasites prior to differentiation and to further classify bradyzoite-induced genes, thus allowing a more comprehensive view of changes in gene expression than is provided by standard expression profiles. Newly identified developmentally regulated genes include putative surface proteins (a SAG1-related protein, SRS9, and a mucin-domain containing protein), regulatory and metabolic enzymes (methionine aminopeptidase, oligopeptidase, aminotransferase, and glucose-6-phosphate dehydrogenase homologues), and a subset of genes encoding secretory organelle proteins (MIC1, ROP1, ROP2, ROP4, GRA1, GRA5, and GRA8). This analysis permits the first in-depth look at changes in gene expression during development of this complex protozoan parasite.
机译:弓形虫的无性发育是寄生虫生命周期的重要方面,可以传播并避免宿主的免疫反应。将快速分裂的速殖子分化成缓慢生长的整节的缓殖子涉及生理和形态的重大变化。我们产生了约4,400个弓形虫cDNA的微阵列,代表了至少600个基因(基于部分测序),并用这些微阵列研究了速殖子向缓殖子分化过程中转录水平的变化。这种方法使我们能够(i)确定先前描述的发育调控基因的表达谱,(ii)鉴定新的发育调控基因,以及(iii)基于转录水平变化的时间和幅度来鉴定不同的基因类别。尽管微阵列分析通常涉及比较不同时间点的mRNA水平,但我们已经开发出一种方法来测量给定时间点基因之间的相对转录本丰度。该方法用于确定分化前寄生虫的转录水平,并进一步对缓殖子诱导的基因进行分类,因此与标准表达谱相比,可以更全面地了解基因表达的变化。新近确定的发育调控基因包括推定的表面蛋白(SAG1相关蛋白, SRS9 和含有粘蛋白结构域的蛋白),调节和代谢酶(蛋氨酸氨基肽酶,寡肽酶,氨基转移酶和葡萄糖6 -磷酸脱氢酶同源物),以及编码分泌型细胞器蛋白的基因的子集(MIC1,ROP1,ROP2,ROP4,GRA1,GRA5和GRA8)。这种分析允许在这种复杂的原生动物寄生虫的发育过程中首次深入研究基因表达的变化。

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