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Typing of Chlamydia psittaci to monitor epidemiology of psittacosis and aid disease control in the Netherlands, 2008 to 2013

机译:2008年至2013年在荷兰键入鹦鹉热衣原体以监测鹦鹉热流行病学并控制疾病

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A simple genotyping method was developed and validated for all known Chlamydia psittaci reference genotypes. C. psittaci is currently divided into nine genotypes (A-F, E/B, M56 and WC), all more or less associated with the preferred avian host. This method targeting variable domain 4 of the ompA gene has a lowest detection limit of 1 to 10 copies per PCR and was applied to 69 human samples collected in nine hospitals in the Netherlands from September 2008 until the end of October 2013. Genotype A was the most prevalent genotype. In addition, genotypes B, C, a new genotype, and C. abortus were found. A C. caviae infection was detected as a result of extension of this surveillance study to the national level. The sensitivity of this method compared with our real-time diagnostic PCR was 0.98 (66/67 typable samples). Specificity was 1.0 based on 33 commonly encountered bacterial and yeast species and 20 human respiratory samples. This typing method could help monitor C. psittaci infections in humans and provides insight into the relationships between notified human 'psittacosis' cases and the probable avian and other animal sources. When needed, a result can be obtained within 24 hours..
机译:开发了一种简单的基因分型方法,并针对所有已知的鹦鹉热衣原体参考基因型进行了验证。鹦鹉热衣原体目前分为九种基因型(A-F,E / B,M56和WC),或多或少与首选禽类宿主相关。这种针对ompA基因可变域4的方法的最低检测限为每个PCR 1至10个拷贝,自2008年9月至2013年10月底,该方法已应用于荷兰9家医院收集的69个人类样品。最流行的基因型。另外,发现了基因型B,C,新基因型和流产梭状芽胞杆菌。由于这项监视研究扩展到了国家一级,因此检测到了卡氏假丝酵母感染。与我们的实时诊断PCR相比,该方法的灵敏度为0.98(66/67可打字样品)。基于33种常见细菌和酵母菌以及20种人类呼吸道样本,特异性为1.0。这种打字方法可以帮助监测人体内的鹦鹉热衣原体感染,并提供对已知的人“鹦鹉热”之间的关系的了解。病例以及可能的禽类和其他动物来源。如果需要,可以在24小时内获得结果。

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