首页> 外文期刊>Ecology and Evolution >Green‐shifting of SWS2A opsin sensitivity and loss of function of RH2‐A opsin in flounders, genus Verasper
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Green‐shifting of SWS2A opsin sensitivity and loss of function of RH2‐A opsin in flounders, genus Verasper

机译:比目鱼属中的SWS2A视蛋白敏感性的绿色转变和比目鱼RH2-A视蛋白功能的丧失

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We identified visual opsin genes for three flounder species, including the spotted halibut ( Verasper variegatus ), slime flounder ( Microstomus achne ), and Japanese flounder ( Paralichthys olivaceus ). Structure and function of opsins for the three species were characterized together with those of the barfin flounder ( V.?moseri ) that we previously reported. All four flounder species possessed five basic opsin genes, including lws , sws1 , sws2 , rh1 , and rh2 . Specific features were observed in rh2 and sws2 . The rh2‐a , one of the three subtypes of rh2 , was absent in the genome of V.?variegatus and pseudogenized in V.?moseri . Moreover, rh2‐a mRNA was not detected in M.?achne and P.?olivaceus , despite the presence of a functional reading frame. Analyses of the maximum absorption spectra (λ max ) estimated by in vitro reconstitution indicated that SWS2A of M.?achne (451.9?nm) and P.?olivaceus (465.6?nm) were blue‐sensitive, whereas in V.?variegatus (485.4?nm), it was green‐sensitive and comparable to V.?moseri (482.3?nm). Our results indicate that although the four flounder species possess a similar opsin gene repertoire, the SWS2A opsin of the genus Verasper is functionally green‐sensitive, while its overall structure remains conserved as a blue‐sensitive opsin. Further, the rh2‐a function seems to have been reduced during the evolution of flounders. λ max values of predicted ancestral SWS2A of Pleuronectiformes and Pleuronectidae was 465.4 and 462.4?nm, respectively, indicating that these were blue‐sensitive. Thus, the green‐sensitive SWS2A is estimated to be arisen in ancestral Verasper genus. It is suggested that the sensitivity shift of SWS2A from blue to green may have compensated functional reduction in RH2‐A.
机译:我们确定了三种比目鱼的视觉视蛋白基因,包括斑点大比目鱼(Verasper variegatus),粘液比目鱼(Microstomus achne)和日本比目鱼(Paralichthys olivaceus)。这三个物种的视蛋白的结构和功能与我们先前报道的巴芬比目鱼(V.?moseri)的结构和功能一起进行了表征。所有四个比目鱼物种都具有五个基本视蛋白基因,包括lws,sws1,sws2,rh1和rh2。在rh2和sws2中观察到特定特征。 rh2亚型是rh2的三个亚型之一,在变异弧菌的基因组中不存在,而在变异弧菌中被假基因化。此外,尽管存在功能性阅读框,在M.?achne和P.?olivaceus中未检测到rh2-a mRNA。通过体外重构估算的最大吸收光谱(λmax)分析表明,M.?achne(451.9?nm)和P.?olivaceus(465.6?nm)的SWS2A对蓝敏感,而V.?variegatus(S. 485.4?nm),对绿色敏感,可与莫氏弧菌(482.3?nm)相媲美。我们的结果表明,尽管这四个比目鱼物种具有类似的视蛋白基因库,但Verasper属的SWS2A视蛋白在功能上对绿色敏感,而其总体结构仍然对蓝敏感的视蛋白保持保守。此外,在比目鱼进化过程中,rh2-a功能似乎已降低。预测的斑节纲和斑节纲祖先SWS2A的λmax分别为465.4和462.4?nm,表明它们是蓝敏感的。因此,估计绿色敏感的SWS2A起源于祖先的Verasper属。建议将SWS2A的灵敏度从蓝色更改为绿色可能可以补偿RH2-A的功能降低。

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