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A new tool for power analysis of fixed plot data: Using simulations and mixed effects models to evaluate forest metrics

机译:用于固定样地数据功率分析的新工具:使用模拟和混合效应模型评估森林指标

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Since 2006, the National Park Service's Northeast Temperate Network (NETN) has been monitoring forest health in 10 national park units in the northeastern U.S. using a protocol adapted from the U.S. Forest Service Forest Inventory and Analysis Program. To ensure current methods are appropriate for monitoring long‐term trends in forest composition, structure and function, we performed a power analysis of key forest metrics using data collected in each park and covering two four‐year survey cycles. We determined statistical power by repeatedly generating bootstrapped datasets with specified percent change between survey cycles in the value of each metric, and then testing whether a mixed effects model detected a significant change. We applied effect sizes ranging from a 50% decline to a 50% increase in 5% increments. Power analyses indicated that, for most key forest metrics, our monitoring program met the target of detecting a 40% change in a metric over a 12‐year period with 80% power and a Type I error rate of 0.10. Power also tended to improve with subsequent repeated surveys. Native species richness and live‐tree basal area metrics consistently performed well for all parks. Average percent cover of plant groups performed better than quadrat frequency. Regeneration metrics performed best in parks with low or high regeneration rates. Coarse woody debris volume, snag abundance, and invasive species richness did not meet the trend detection target in multiple parks. In most cases, metrics that failed to meet the trend detection target in one or several parks had high proportions of zeros and relatively low overall values for the respective park. In cases where high metric variability was the reason for poor trend detection, results indicated that post‐stratifying can sometimes improve power. We developed the power analysis tool in R to be applicable for a range of data types, including proportional and count data, and for any number of sampling areas (e.g., parks) and sampling units (e.g., plots). Our approach represents one of the few tools available that can assess the power to detect change over time using mixed effects models.
机译:自2006年以来,国家公园管理局的东北温带网络(NETN)一直使用美国森林服务局森林清单和分析计划改编的协议,对美国东北部10个国家公园单位的森林健康进行监控。为了确保当前的方法适合监测森林组成,结构和功能的长期趋势,我们使用每个公园收集的数据进行了关键森林指标的功效分析,涵盖两个四年的调查周期。我们通过重复生成自举数据集来确定统计功效,这些数据在调查周期之间以每个度量值的指定百分比变化,然后测试混合效应模型是否检测到显着变化。我们应用的效果大小范围从50%下降到5%递增50%。功率分析表明,对于大多数关键森林指标,我们的监控程序均达到了在12年内检测到指标40%的变化(功率为80%,I类错误率为0.10)的目标。随着随后的重复调查,能力也趋于提高。在所有公园中,本地物种的丰富度和活树的基础面积指标始终表现良好。植物群的平均覆盖率好于二次方频率。在再生率低或高的公园中,再生指标表现最佳。粗大的木屑量,断枝丰度和入侵物种丰富度未达到多个公园中趋势检测的目标。在大多数情况下,一个或多个公园中未达到趋势检测目标的度量标准具有较高的零比例,而各个公园的总体值相对较低。如果度量的高变异性是趋势检测不佳的原因,则结果表明后分层有时可以提高性能。我们开发了R中的功效分析工具,适用于各种数据类型,包括比例和计数数据,以及任意数量的采样区域(例如公园)和采样单位(例如地块)。我们的方法代表了几种可用的工具,这些工具可以评估使用混合效应模型随时间变化的能力。

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