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首页> 外文期刊>International journal of endocrinology >Identification of Differentially Expressed Genes in Pituitary Adenomas by Integrating Analysis of Microarray Data
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Identification of Differentially Expressed Genes in Pituitary Adenomas by Integrating Analysis of Microarray Data

机译:整合分析芯片数据鉴定垂体腺瘤中差异表达基因

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Pituitary adenomas, monoclonal in origin, are the most common intracranial neoplasms. Altered gene expression as well as somatic mutations is detected frequently in pituitary adenomas. The purpose of this study was to detect differentially expressed genes (DEGs) and biological processes during tumor formation of pituitary adenomas. We performed an integrated analysis of publicly available GEO datasets of pituitary adenomas to identify DEGs between pituitary adenomas and normal control (NC) tissues. Gene function analysis including Gene Ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis, and protein-protein interaction (PPI) networks analysis was conducted to interpret the biological role of those DEGs. In this study we detected 3994 DEGs (2043 upregulated and 1951 downregulated) in pituitary adenoma through an integrated analysis of 5 different microarray datasets. Gene function analysis revealed that the functions of those DEGs were highly correlated with the development of pituitary adenoma. This integrated analysis of microarray data identified some genes and pathways associated with pituitary adenoma, which may help to understand the pathology underlying pituitary adenoma and contribute to the successful identification of therapeutic targets for pituitary adenoma.
机译:起源于单克隆的垂体腺瘤是最常见的颅内肿瘤。垂体腺瘤中经常检测到基因表达改变和体细胞突变。这项研究的目的是检测垂体腺瘤形成过程中的差异表达基因(DEG)和生物学过程。我们对垂体腺瘤的公开可用GEO数据集进行了综合分析,以确定垂体腺瘤与正常对照(NC)组织之间的DEG。进行了基因功能分析,包括基因本体论(GO),京都基因与基因组百科全书(KEGG)途径富集分析和蛋白质-蛋白质相互作用(PPI)网络分析,以解释这些DEG的生物学作用。在这项研究中,我们通过对5种不同的微阵列数据集进行了综合分析,检测出3994个垂体腺瘤(2043上调,1951年下调)。基因功能分析表明,这些DEGs的功能与垂体腺瘤的发生高度相关。对微阵列数据的这种综合分析确定了一些与垂体腺瘤相关的基因和途径,这可能有助于了解垂体腺瘤的病理学基础,并有助于成功地确定垂体腺瘤的治疗靶标。

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