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Very Strong Parallel Interactions Between Two Saturated Acyclic Groups Closed with Intramolecular Hydrogen Bonds Forming Hydrogen-Bridged Rings

机译:两个饱和无环基团之间的非常强的平行相互作用被分子内氢键封闭,形成氢桥环

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Saturated acyclic four-atom groups closed with a classic intramolecular hydrogen bond, generating planar five-membered rings (hydrogen-bridged quasi-rings), in which at least one of the ring atoms is bonded to other non-ring atoms that are not in the ring plane and, thus, capable to form intermolecular interactions, were studied in this work, in order to find the preferred mutual positions of these species in crystals and evaluate strength of intermolecular interactions. We studied parallel interactions of these rings by analysing crystal structures in the Cambridge Structural Database (CSD) and by quantum chemical calculations. The rings can have one hydrogen atom out of the ring plane that can form hydrogen bonds between two parallel rings. Hence, in these systems with parallel rings, two types of hydrogen bonds can be present, one in the ring, and the other one between two parallel rings. The CSD search showed that 27% of the rings in the crystal structures form parallel interactions. The calculations at very accurate CCSD(T)/CBS level revealed strong interactions, in model systems of thiosemicarbazide, semicarbazide and glycolamide dimers the energies are ?9.68, ?7.12 and ?4.25 kcal/mol. The hydrogen bonds between rings, as well as dispersion interactions contribute to the strong interaction energies.
机译:饱和的无环四原子基团通过经典的分子内氢键封闭,生成平面五元环(氢桥准环),其中至少一个环原子与不位于环中的其他非环原子键合为了找到这些物种在晶体中的首选相互位置并评估分子间相互作用的强度,在这项工作中研究了环平面并因此能够形成分子间相互作用。我们通过分析剑桥结构数据库(CSD)中的晶体结构并通过量子化学计算研究了这些环的平行相互作用。这些环可以在环平面之外具有一个氢原子,该氢原子可以在两个平行的环之间形成氢键。因此,在这些具有平行环的系统中,可以存在两种类型的氢键,一种在环中,另一种在两个平行环之间。 CSD搜索显示,晶体结构中27%的环形成平行相互作用。在非常精确的CCSD(T)/ CBS水平下进行的计算显示出强烈的相互作用,在硫代氨基脲,氨基脲和甘醇酰胺二聚体的模型系统中,能量为?9.68,?7.12和?4.25 kcal / mol。环之间的氢键以及分散相互作用有助于形成强大的相互作用能。

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