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Application and evaluation of the MLVA typing assay for the Brucella abortus strains isolated in Korea

机译:MLVA分型法在韩国分离的布鲁氏菌流产菌株中的应用和评估

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Background A Brucella eradication program has been executed in Korea. To effectively prevent and control brucellosis, a molecular method for genetic identification and epidemiological trace-back must be established. As part of that, the MLVA typing assay was evaluated and applied to B. abortus isolates for analyzing the characteristics of the regional distribution and relationships of foreign isolates. Results A total of 177 isolates originating from 105 cattle farms for the period 1996 to 2008 were selected as representatives for the nine provinces of South Korea. A dendrogram of strain relatedness was constructed in accordance with the number of tandem repeat units for 17 loci so that it was possible to trace back in the restricted areas. Even in a farm contaminated by one source, however, the Brucella isolates showed an increase or decrease in one TRs copy number at some loci with high DI values. Moreover, those 17 loci was confirmed in stability via in-vitro and in-vivo passage, and found to be sufficiently stable markers that can readily identify the inoculated strain even if minor changes were detected. In the parsimony analysis with foreign Brucella isolates, domestic isolates were clustered distinctively, and located near the Central and Southern American isolates. Conclusion The MLVA assay has enough discrimination power in the Brucella species level and can be utilized as a tool for the epidemiological trace-back of the B. abortus isolates. But it is important to consider that Brucella isolates may be capable of undergoing minor changes at some loci in the course of infection or in accordance with the changes of the host.
机译:背景技术在韩国已经执行了布鲁氏菌根除计划。为了有效预防和控制布鲁氏菌病,必须建立一种用于遗传鉴定和流行病学追溯的分子方法。作为其一部分,评估了MLVA分型测定并将其应用于流产芽孢杆菌分离株,以分析区域分离物的特征和外来分离株的关系。结果1996年至2008年期间,共选择了来自105个养牛场的177株分离株作为韩国9个省的代表。根据17个基因座的串联重复单元数构建了应变相关性树状图,以便可以在限制区域内追溯。但是,即使在一个受到一种污染源污染的农场中,布鲁氏菌分离株在一些具有高DI值的基因座上也显示出一个TRs拷贝数的增加或减少。此外,通过体外和体内传代证实了这17个基因座的稳定性,并且发现它们是足够稳定的标志物,即使检测到微小的变化也可以容易地鉴定接种的菌株。在与国外布鲁氏菌分离株的简约分析中,国内分离株明显聚集,并位于中美洲和南美分离株附近。结论MLVA测定法在布鲁氏菌属种中具有足够的判别力,可作为流产双歧杆菌分离株流行病学追溯的工具。但重要的是要考虑到布鲁氏菌分离株可能在感染过程中或根据宿主的变化在某些基因座上发生微小变化。

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