首页> 外文期刊>Beilstein journal of organic chemistry. >The β-cyclodextrin/benzene complex and its hydrogen bonds – a theoretical study using molecular dynamics, quantum mechanics and COSMO-RS
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The β-cyclodextrin/benzene complex and its hydrogen bonds – a theoretical study using molecular dynamics, quantum mechanics and COSMO-RS

机译:β-环糊精/苯配合物及其氢键–使用分子动力学,量子力学和COSMO-RS进行的理论研究

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Four highly ordered hydrogen-bonded models of β-cyclodextrin (β-CD) and its inclusion complex with benzene were investigated by three different theoretical methods: classical quantum mechanics (QM) on AM1 and on the BP/TZVP-DISP3 level of approximation, and thirdly by classical molecular dynamics simulations (MD) at different temperatures (120 K and 273 to 300 K). The hydrogen bonds at the larger O2/O3 rim of empty β-CDs prefer the right-hand orientation, e.g., O3-H…O2-H in the same glucose unit and bifurcated towards …O4 and O3 of the next glucose unit on the right side. On AM1 level the complex energy was ?2.75 kcal mol?1 when the benzene molecule was located parallel inside the β-CD cavity and ?2.46 kcal mol?1 when it was positioned vertically. The AM1 HOMO/LUMO gap of the empty β-CD with about 12 eV is lowered to about 10 eV in the complex, in agreement with data from the literature. AM1 IR spectra displayed a splitting of the O–H frequencies of cyclodextrin upon complex formation. At the BP/TZVP-DISP3 level the parallel and vertical positions from the starting structures converged to a structure where benzene assumes a more oblique position (?20.16 kcal mol?1 and ?20.22 kcal mol?1, resp.) as was reported in the literature. The character of the COSMO-RS σ-surface of β-CD was much more hydrophobic on its O6 rim than on its O2/O3 side when all hydrogen bonds were arranged in a concerted mode.
机译:通过三种不同的理论方法研究了四个高度有序的β-环糊精(β-CD)及其与苯的包合物的氢键模型:AM1上的经典量子力学(QM)和BP / TZVP-DISP3的近似水平,第三,通过在不同温度(120 K和273至300 K)下的经典分子动力学模拟(MD)。空β-CD的较大的O2 / O3边缘的氢键倾向于右手方向,例如,在同一葡萄糖单元中的O3-H … O2-H朝着…分叉。 右侧下一个葡萄糖单元的O4和O3。在AM1水平,当苯分子平行位于β-CD腔内部时,复能为?2.75 kcal mol ?1 ;当苯分子平行时,其复能为?2.46 kcal mol ?1 。垂直放置。与文献中的数据一致,在复合物中空β-CD的AM1 HOMO / LUMO缺口大约为12 eV,降低到大约10 eV。 AM1红外光谱显示,复合物形成后,环糊精的O–H频率发生了分裂。在BP / TZVP-DISP3水平上,起始结构的平行和垂直位置会聚为苯占据更倾斜位置的结构(?20.16 kcal mol ?1 和?20.22 kcal mol ?1 ,分别)。当所有氢键都以协调方式排列时,β-CD的COSMO-RSσ-表面的特征在O6边缘比在O2 / O3一侧更疏水。

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