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Efficient two phase heuristic routing technique for digital microfluidic biochip

机译:数字微流控生物芯片的高效两阶段启发式路由技术

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Digital microfluidic biochip's (DMFB's) have emerged as an alternative to various in-vitro diagnostic tests and are expected to be closely coupled with cyber physical systems. Efficient-error-free-routing and cross-contamination minimisation are needed during bioassay operations on DMFB. This study proposes a two phase heuristic technique for routing droplets on a two-dimensional DMFB. Initially it attempts to route maximum number of nets in a concurrent fashion depending on the evaluated value of a proposed function named interfering index (IInet). Then exact routing is attempted based on tabulation minimisation process. Remaining nets having interfering index values higher than threshold will be routed considering various constraints in DMFB framework. In second phase another metric named routable ratio (RR) is proposed and depending on RR metric, the routing order among conflicting paths are prioritised to avoid deadlock from there onwards till the droplet reaches its target location. Finally we formulate droplet movement problem as satisfiability problems and solve with SAT based solver engine if higher number of overlapping (≥5) nets exist. Experimental results on benchmark suite I and III show our proposed technique significantly reduces latest arrival time, average assay execution time and number of used cells as compared with earlier methods.
机译:数字微流控生物芯片(DMFB)已成为各种体外诊断测试的替代产品,并有望与网络物理系统紧密结合。在DMFB上进行生物测定操作期间,需要高效无错的路由和交叉污染最小化。这项研究提出了一种二维启发式技术,用于在二维DMFB上路由墨滴。最初,它尝试以并发方式路由最大数量的网络,这取决于提议的名为干扰指数(IInet)的函数的评估值。然后根据制表最小化过程尝试进行精确路由。考虑到DMFB框架中的各种约束,将对具有高于阈值的干扰索引值的其余网络进行路由。在第二阶段中,提出了另一个称为可路由比率(RR)的度量,并根据RR度量,对冲突路径之间的路由顺序进行了优先级排序,以避免从那里开始的死锁,直到液滴到达其目标位置为止。最后,我们将液滴运动问题公式化为可满足性问题,如果存在更多数量的重叠(≥5)网络,则使用基于SAT的求解器引擎进行求解。在基准套件I和III上的实验结果表明,与较早的方法相比,我们提出的技术显着减少了最新到达时间,平均化验执行时间和使用的细胞数。

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