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An Eulerian/XFEM formulation for the large deformation of cortical cell membrane

机译:皮质细胞膜大变形的欧拉/ XFEM配方

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Most animal cells are surrounded by a thin layer of actin meshwork below their membrane, commonly known as the actin cortex (or cortical membrane). An increasing number of studies have highlighted the role of this structure in many cell functions including contraction and locomotion, but modelling has been limited by the fact that the membrane thickness (about 1 n,m) is usually much smaller than the typical size of a cell (10-100 p,m). To overcome theoretical and numerical issues resulting from this observation, we introduce in this paper a continuum formulation, based on surface elasticity, that views the cortex as an infinitely thin membrane that can resists tangential deformation. To accurately model the large deformations of cells, we introduced equilibrium equations and constitutive relations within the Eulerian viewpoint such that all quantities (stress, rate of deformation) lie in the current configuration. A solution procedure is then introduced based on a coupled extended finite element approach that enables a continuum solution to the boundary value problem in which discontinuities in both strain and displacement (due to cortical elasticity) are easily handled. We validate the approach by studying the effect of cortical elasticity on the deformation of a cell adhering on a stiff substrate and undergoing internal contraction. Results show very good prediction of the proposed method when compared with experimental observations and analytical solutions for simple cases. In particular, the model can be used to study how cell properties such as stiffness and contraction of both cytoskeleton and cortical membrane lead to variations in cell's surface curvature. These numerical results show that the proposed method can be used to gain critical insights into how the cortical membrane affects cell deformation and how it may be used as a means to determine a cell's mechanical properties by measuring curvatures of its membrane.
机译:大多数动物细胞在其膜下通常被称为肌动蛋白皮层(或皮质膜)的膜下被一薄层肌动蛋白网包围。越来越多的研究突显了这种结构在许多细胞功能(包括收缩和运动)中的作用,但是建模受到以下事实的限制:膜厚度(约1 n,m)通常比典型的a膜小得多。电池(10-100 p,m)。为了克服由该观察结果引起的理论和数值问题,我们在本文中介绍了一种基于表面弹性的连续体公式,该公式将皮质视为可以抵抗切向变形的无限​​薄的膜。为了准确地模拟细胞的大变形,我们在欧拉观点中引入了平衡方程和本构关系,以使所有量(应力,变形率)都处于当前配置中。然后基于耦合扩展有限元方法引入了一种求解过程,该方法使得能够连续解决边界值问题,在该边界值问题中,应变和位移的不连续性(由于皮层弹性)都易于处理。我们通过研究皮质弹性对粘附在坚硬基质上并经历内部收缩的细胞变形的影响来验证该方法。与简单案例的实验观察结果和分析解决方案相比,结果表明了该方法的良好预测。特别是,该模型可用于研究细胞特性,例如细胞骨架和皮质膜的硬度和收缩如何导致细胞表面曲率的变化。这些数值结果表明,所提出的方法可用于深入了解皮质膜如何影响细胞变形以及如何将其用作通过测量细胞膜曲率来确定细胞机械性能的手段。

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