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A growth model of human papillomavirus type 16 designed from cellular automata and agent-based models

机译:从细胞自动机和基于代理的模型设计的人乳头瘤病毒16型生长模型

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Objective: This paper presents a conceptual model that is developed upon a characterization of human papillomavirus type 16 (HPV16) which is used to build a simulation prototype of the HPV16 growth process. Methodology: The human papillomavirus type 16 is the principal virus detected in invasive lesions of cervical cancer, and associated with the greater persistence and prevalence in pre-malignant and malignant lesions. The probability of acquiring an infection with HPV16 is extremely high in sexually active individuals. However, an HPV16 infection can disappear after becoming a histological confirmed case. According to the characterization of HPV16 proposed in this paper, cells as compared to a society behaves as a complex system, i.e., cells behave in a cooperative manner, following a set of rules defined by local interactions among them. Such complex system is defined by combining a cellular automaton and agent-based models. In this way, the behavior of the HPV16 is simulated by allowing the cellular automaton to follow such parameterized behavior rules. Results: Both cross-sectional and prospective studies indicate that HPV16 infection persistence increase the risk of high-grade CIN, as observed in the results provided by the growth simulation model of HPV16. The average growth rate extrapolated over 52 weeks (12 months) and calculated by the model showed a 37.87% growth for CIN1,35.53% for C1N2 and 16.92% for CIN3. Remarkably, these results are similar to the results obtained and reported by clinical studies. For example, the results obtained using the proposed model for CIN2 and the results obtained by OEstoer [36], have a differential of 0.53 percentage points while have a differential of 2.23 percentage points with the results obtained by Insinga et al. [51 ]. Also, for the CIN3, the results obtained using the proposed model, have a differential of 2.92 percentage points with the Insinga et al. [52], results. Conclusion: Through the specification of parameterized behavior rules for HPV16 that are simulated under the combined technique of cellular automata and agent-based models, the HPV life cycle can be simulated allowing for observations at different stages. The proposed model then can be used as a support tool in the investigation of HPV16, in particular (as part of our future work) to develop drugs as agents in the control of the HPV16 disease.
机译:目的:本文提出了一种基于16型人乳头瘤病毒(HPV16)表征的概念模型,该模型用于构建HPV16生长过程的模拟原型。方法:人类乳头瘤病毒16型是在宫颈癌的浸润性病变中检出的主要病毒,与恶性前和恶性病变中更大的持续性和患病率相关。在性活跃的个体中,感染HPV16的可能性非常高。但是,HPV16感染在成为组织学确诊病例后可以消失。根据本文提出的HPV16的特征,与社会相比,细胞的行为就像一个复杂的系统,即,细胞遵循一种由它们之间的局部相互作用所定义的规则,以协作的方式行为。通过结合细胞自动机和基于代理的模型来定义这种复杂的系统。以这种方式,通过允许蜂窝自动机遵循这种参数化的行为规则来模拟HPV16的行为。结果:横断面研究和前瞻性研究均表明,HPV16感染持续性增加了高级别CIN的风险,这在HPV16生长模拟模型提供的结果中可以观察到。通过模型推断的52周(12个月)内的平均增长率表明,CIN1的增长率为37.87%,C1N2的增长率为35.53%,CIN3的增长率为16.92%。值得注意的是,这些结果与临床研究获得和报道的结果相似。例如,使用提议的CIN2模型获得的结果和OEstoer [36]获得的结果与Insinga等人获得的结果相差0.53个百分点,而相差2.23个百分点。 [51]。同样,对于CIN3,使用建议的模型获得的结果与Insinga等人的结果相差2.92个百分点。 [52],结果。结论:通过在细胞自动机和基于代理的模型相结合的技术下模拟的HPV16参数化行为规则的规范,可以模拟HPV生命周期,以便在不同阶段进行观察。然后,提出的模型可以用作研究HPV16的支持工具,尤其是(作为我们未来工作的一部分)以开发药物作为控制HPV16疾病的药物。

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