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Development of a Quantitative Metabolomic Approach to Study Clinical Human Fecal Water Metabolome Based on Trimethylsilylation Derivatization and GC/MS Analysis

机译:基于三甲基甲硅烷基化衍生化和GC / MS分析的定量代谢组学方法研究临床人类粪便水代谢组的开发

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摘要

Metabolomic analysis of human fecal water recentlynaroused increasing attention with the importance of fecalnmetabolome in exploring the relationships between symbioticngut microflora and human health. In this study, wendeveloped a quantitative metabolomic method for humannfecal water based on trimethylsilylation derivatization andnGC/MS analysis. Methanol was found to be the bestnsolvent for protein precipitation and extraction of fecalnwater metabolome. Within the optimized linear range ofnsampling volume (less than 50 μL), compounds showedna good linearity with a correlation coefficient higher thann0.99. The developed method showed good repeatabilitynfor both sample preparation and GC/MS analysis with thenrelative standard deviations lower than 10% for mostncompounds and less than 20% for a few other ones. Thenmethod was further validated by studying analytical variabilitynusing a set of clinical samples as well as a poolednsample. The pH value and matrix effects were the mainnfactors affecting the accuracy of quantitative calibrationncurves. The increased pH value decreased the loss ofnshort chain fatty acids during lyophilization. Spiking fecalnwater to a standard mixture significantly enhanced thenaccuracy of quantitative calibration curves, probably duento the inhibition of volatile loss during lyophilization andnthe increase of compound solubility in the derivatizationnmedium. A strategy for calibration curve preparation wasnproposed in order to avoid the effects of pH and matrix.nTotally, 133 compounds were structurally confirmed fromna set of clinical samples, and 33 of them were quantified,nwhich demonstrates the suitability of this method for anquantitative metabolomic study of human fecal waternsamples.
机译:人类粪便水的代谢组学分析最近引起了越来越多的关注,即粪便代谢物组在探索共生菌微生物群与人类健康之间关系方面的重要性。在这项研究中,Wen开发了一种基于三甲基甲硅烷基化衍生化法和nGC / MS分析的人粪便水定量代谢组学方法。发现甲醇是沉淀和提取粪尿水代谢组蛋白的最佳溶剂。在优化的采样体积线性范围内(小于50μL),化合物表现出良好的线性,相关系数高于0.99。所开发的方法对样品制备和GC / MS分析均显示出良好的可重复性,大多数化合物的相对标准偏差均低于10%,而其他一些化合物的相对标准偏差均低于20%。然后,通过使用一组临床样本以及一个混合样本研究分析变异性,进一步验证了该方法。 pH值和基质效应是影响定量校准曲线准确性的主要因素。 pH值的增加减少了冻干过程中短链脂肪酸的损失。将fecalnwater掺入标准混合物中可显着增强定量校准曲线的准确性,这可能是由于抑制了冻干过程中的挥发损失,以及化合物在衍生化钕中的溶解度增加。为了避免pH值和基质的影响,提出了一种制备校正曲线的策略。n从临床样本中总共确认了133种化合物的结构,并对其中33种进行了定量,这表明该方法适用于定量的代谢组学研究。人类粪便水样。

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  • 来源
    《Analytical Chemistry》 |2010年第15期|p.6447-6456|共10页
  • 作者单位

    INRA, UMR 1019, Plateforme d’Exploration du Me´tabolisme, Nutrition Humaine, F-63122, Saint Gene`s Champanelle,France, and Clermont Universite´ , UFR Me´decine, UMR 1019 Nutrition Humaine, F-63000, Clermont-Ferrand, France;

  • 收录信息 美国《科学引文索引》(SCI);美国《工程索引》(EI);美国《生物学医学文摘》(MEDLINE);美国《化学文摘》(CA);
  • 原文格式 PDF
  • 正文语种 eng
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