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Diversity of free-living marine nematodes (Enoplida) from Baja California assessed by integrative taxonomy

机译:通过综合分类法评估了下加利福尼亚州自生海洋线虫(Enoplida)的多样性

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摘要

We used morphological and molecular approaches to evaluate the diversity of free-living marine nematodes (order Enoplida) at four coastal sites in the Gulf of California and three on the Pacific coast of Baja California, Mexico. We identified 22 morphological species belonging to six families, of which Thoracostomopsidae and Oncholaimidae were the most diverse. The genus Mesacanthion (Thoracostomopsidae) was the most widespread and diverse. Five allopatric species, genetically and morphologically differentiated, were found in two localities in the Gulf of California (M. sp1 and M. sp2) and three in the Pacific coast (M. sp3, M. sp4 and M. sp5). Overall, we produced 19 and 20 sequences for the 18S and 28S genes, respectively. Neither gene displayed intraspecific polymorphisms, which allowed us to establish that some morphological variation was likely either ontogenetic or due to phenotypic plasticity. Although 18S and 28S phylogenies were topologically congruent (incongruence length difference test, P > 0.05), divergences between species were much higher in the 28S gene. Moreover, this gene possessed a stronger phylogenetic signal to resolve relationships involving Rhabdodemania and Bathylaimus. On the other hand, the close relationship of Pareurystomina (Enchilidiidae) with oncholaimids warrants further study. The 28S sequences (D2D3 domain) may be better suited for DNA barcoding of marine nematodes than those from the 18S rDNA, particularly for differentiating closely related or cryptic species. Finally, our results underline the relevance of adopting an integrative approach encompassing morphological and molecular analyses to improve the assessment of marine nematode diversity and advance their taxonomy.Electronic supplementary materialThe online version of this article (doi:10.1007/s00227-010-1439-z) contains supplementary material, which is available to authorized users.
机译:我们使用形态学和分子方法评估了加利福尼亚湾的四个沿海站点和墨西哥下加利福尼亚州的太平洋海岸的三个沿海站点的自由活动海洋线虫(Enoplida目)的多样性。我们确定了属于六个科的22种形态学物种,其中胸果蝇科和Oncholaimidae是最多样化的。 Mesacanthion(Thoracostomopsidae)属是最广泛和最多样化的。在加利福尼亚湾的两个地区(M.sp1和M.sp2)和太平洋海岸的三个地区(M.sp3,M.sp4和M.sp5)发现了5种异源物种,从遗传和形态上都有差异。总体而言,我们分别为18S和28S基因产生了19和20个序列。这两个基因均未显示出种内多态性,这使我们能够确定某些形态学变异可能是遗传的,也可能是由于表型可塑性引起的。尽管18S和28S系统发育在拓扑上是一致的(不一致长度差检验,P> 0.05),但28S基因中物种之间的差异要大得多。此外,该基因具有更强的系统发育信号,可以解决涉及横纹肌瘤和深蓝细菌的关系。另一方面,Pareurystomina(Enchilidiidae)与oncholaimids的密切关系值得进一步研究。与18S rDNA相比,28S序列(D2D3域)可能更适合于海洋线虫的DNA条形码编码,特别是用于区分密切相关或隐秘的物种。最后,我们的结果强调了采用包括形态学和分子分析的综合方法以改善对海洋线虫多样性的评估并提高其分类学的意义。电子补充材料本文的在线版本(doi:10.1007 / s00227-010-1439-z )包含补充材料,授权用户可以使用。

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