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Diagnostics for a troubled backbone: testing topological hypotheses of trapelioid lichenized fungi in a large-scale phylogeny of Ostropomycetidae (Lecanoromycetes)

机译:诊断有问题的骨干网:在大型造骨科(Lecanoromycetes)的系统发育中测试梯形地衣真菌的拓扑假说

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摘要

Trapelioid fungi constitute a widespread group of mostly crust-forming lichen mycobionts that are key to understanding the early evolutionary splits in the Ostropomycetidae, the second-most species-rich subclass of lichenized Ascomycota. The uncertain phylogenetic resolution of the approximately 170 species referred to this group contributes to a poorly resolved backbone for the entire subclass. Based on a data set including 657 newly generated sequences from four ribosomal and four protein-coding gene loci, we tested a series of a priori and new evolutionary hypotheses regarding the relationships of trapelioid clades within Ostropomycetidae. We found strong support for a monophyletic group of nine core trapelioid genera but no statistical support to reject the long-standing hypothesis that trapelioid genera are sister to Baeomycetaceae or Hymeneliaceae. However, we can reject a sister group relationship to Ostropales with high confidence. Our data also shed light on several long-standing questions, recovering Anamylopsoraceae nested within Baeomycetaceae, elucidating two major monophyletic groups within trapelioids (recognized here as Trapeliaceae and Xylographaceae), and rejecting the monophyly of the genus Rimularia. We transfer eleven species of the latter genus to Lambiella and describe the genus Parainoa to accommodate a previously misunderstood species of Trapeliopsis. Past phylogenetic studies in Ostropomycetidae have invoked “divergence order” for drawing taxonomic conclusions on higher level taxa. Our data show that if backbone support is lacking, contrasting solutions may be recovered with different or added data. We accordingly urge caution in concluding evolutionary relationships from unresolved phylogenies.Electronic supplementary materialThe online version of this article (doi:10.1007/s13225-015-0332-y) contains supplementary material, which is available to authorized users.
机译:梯形真菌构成了一个广泛的群体,主要由形成结壳的地衣霉菌组成,这对于了解Ostropomycetidae(第二个物种丰富的地衣状子囊菌)的早期进化分裂至关重要。涉及这一组的大约170个物种的不确定的系统发育分辨率,导致整个亚类的主干分辨能力差。基于包括来自四个核糖体和四个蛋白质编码基因位点的657个新生成序列的数据集,我们测试了关于Ostropomycetidae梯形进化枝之间关系的一系列先验和新进化假设。我们找到了一个由九个核心梯形属组成的单系类群的有力支持,但没有统计支持来拒绝长期以来的假设,即梯形属是Baeomycetaceae或Hymeneliaceae的姐妹。但是,我们可以高度自信地拒绝与Ostropales建立姐妹关系。我们的数据还阐明了几个长期存在的问题,恢复了嵌套在拟杆菌科中的拟南芥科,阐明了梯形藻内的两个主要单系群(在这里被识别为蝶形科和木糖科),并拒绝了Ri草属的单性。我们将后一个属的11个种转移到Lambiella,并描述Parainoa属来适应先前被误解的Trapeliopsis种。过去在兽足科中进行的系统发育研究已援引“发散阶”,以得出有关较高分类群的分类学结论。我们的数据表明,如果缺乏骨干支持,则可以使用不同或添加的数据来恢复对比解决方案。因此,我们在从未解决的系统发育树中得出进化关系时应谨慎行事。电子补充材料本文的在线版本(doi:10.1007 / s13225-015-0332-y)包含补充材料,授权用户可以使用。

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