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Efficient orbit-aware triad and quad census in directed and undirected graphs

机译:有向图和无向图的有效的轨道感知三元和四元普查

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摘要

The prevalence of select substructures is an indicator of network effects in applications such as social network analysis and systems biology. Moreover, subgraph statistics are pervasive in stochastic network models, and they need to be assessed repeatedly in MCMC sampling and estimation algorithms. We present a new approach to count all induced and non-induced four-node subgraphs (the quad census) on a per-node and per-edge basis, complete with a separation into their non-automorphic roles in these subgraphs. It is the first approach to do so in a unified manner, and is based on only a clique-listing subroutine. Computational experiments indicate that, despite its simplicity, the approach outperforms previous, less general approaches.By way of the more presentable triad census, we additionally show how to extend the quad census to directed graphs. As a byproduct we obtain the asymptotically fastest triad census algorithm to date.
机译:选定子结构的普遍性是社交网络分析和系统生物学等应用程序中网络效应的指标。此外,子图统计信息在随机网络模型中无处不在,需要在MCMC采样和估计算法中对其进行重复评估。我们提出了一种新方法,可以在每个节点和每个边缘的基础上对所有诱导和非诱导四节点子图(四倍普查)进行计数,并对其在这些子图中的非自构角色进行分离。这是以统一方式执行此操作的第一种方法,并且仅基于集团列表子例程。计算实验表明,尽管方法简单,但其性能却优于以前的通用方法。通过更具表现力的三元组普查,我们还展示了如何将四元普查扩展到有向图。作为副产品,到目前为止,我们获得了渐近最快的三合会普查算法。

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