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An Antisense RNA-Mediated Transcriptional Attenuation Mechanism Functions in Escherichia coli

机译:反义RNA介导的转录衰减机制在大肠杆菌中的功能。

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摘要

Antisense RNA-mediated transcriptional attenuation is a regulatory mechanism operating in the replication control of two groups of plasmids in gram-positive bacteria, the pT181 group and the inc18 family, represented by pIP501. In contrast, this control mechanism has so far not been identified in gram-negative bacteria or their plasmids. In this work we asked whether such a mechanism can be supported by Escherichia coli. The core replication control regions of plasmids pT181 and pIP501 were transferred into this heterologous host. In vivo lacZ reporter gene assays showed that the antisense RNAs of these plasmids can inhibit lacZ expression and that most of this effect can be accounted for by reduced mRNA readthrough. Northern analyses confirmed that the ratio of attenuated to readthrough target RNA was increased in the presence of the cognate antisense RNA, as expected for this mechanism. Similarly, both antisense RNAs induced premature termination of their cognate target RNAs in an E. coli in vitro transcription system, whereas the noncognate antisense RNAs had no effect. Thus, this report shows that antisense RNA-mediated transcriptional attenuation is supported by at least one gram-negative host, although the data indicate that inhibitory efficiencies are lower than those for, e.g., Bacillus subtilis. Possible explanations for the apparent absence of this control mode in plasmids of gram-negative bacteria are discussed.
机译:反义RNA介导的转录衰减是一种调控机制,可用于革兰氏阳性细菌中两组质粒(pT181组和inc18家族)的复制控制,以pIP501为代表。相反,迄今为止,在革兰氏阴性细菌或其质粒中尚未发现这种控制机制。在这项工作中,我们问大肠埃希氏菌是否可以支持这种机制。将质粒pT181和pIP501的核心复制控制区转移到该异源宿主中。体内lacZ报道基因检测表明,这些质粒的反义RNA可以抑制lacZ表达,并且这种作用的大部分可归因于mRNA透读的减少。 Northern分析证实,在同源反义RNA的存在下,衰减的靶标RNA与通读靶标RNA的比例增加,这是该机制所预期的。同样,两个反义RNA都会在大肠杆菌体外转录系统中诱导其同源靶RNA的过早终止,而非同源反义RNA则没有作用。因此,该报告表明至少一个革兰氏阴性宿主支持反义RNA介导的转录减毒,尽管数据表明抑制效率低于例如枯草芽孢杆菌。讨论了革兰氏阴性细菌质粒中明显缺乏这种控制模式的可能解释。

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