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Density Functional Theory and Molecular Docking Investigations of the Chemical and Antibacterial Activities for 1-(4-Hydroxyphenyl)-3-phenylprop-2-en-1-one

机译:密度函数理论和分子对接研究的1-(4-羟基苯基)-3-苯基填充-2- en-1-on-1的化学和抗菌活性的研究

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摘要

The present investigation informs a descriptive study of 1-(4-Hydroxyphenyl) -3-phenylprop-2-en-1-one compound, by using density functional theory at B3LYP method with 6-311G** basis set. The oxygen atoms and π-system revealed a high chemical reactivity for the title compound as electron donor spots and active sites for an electrophilic attack. Quantum chemical parameters such as hardness (η), softness (S), electronegativity (χ), and electrophilicity (ω) were yielded as descriptors for the molecule’s chemical behavior. The optimized molecular structure was obtained, and the experimental data were matched with geometrical analysis values describing the molecule’s stable structure. The computed FT-IR and Raman vibrational frequencies were in good agreement with those observed experimentally. In a molecular docking study, the inhibitory potential of the studied molecule was evaluated against the penicillin-binding proteins of Staphylococcus aureus bacteria. The carbonyl group in the molecule was shown to play a significant role in antibacterial activity, four bonds were formed by the carbonyl group with the key protein of the bacteria (three favorable hydrogen bonds plus one van der Waals bond) out of six interactions. The strong antibacterial activity was also indicated by the calculated high binding energy (−7.40 kcal/mol).
机译:本研究通过使用6-311g **基础集合,通过使用B3LYP方法的密度泛函理论,通知对1-(4-羟基苯基)-3-苯基丙烯-2-烯-1-一种化合物的描述性研究。氧原子和π系统揭示了标题化合物的高化学反应性,作为电子供体斑点和用于亲电子攻击的活性位点。量子化学参数如硬度(η),柔软性(S),电负性(电泳,电泳(ω)作为分子的化学行为的描述符。获得了优化的分子结构,并且实验数据与描述分子稳定结构的几何分析值匹配。计算的FT-IR和拉曼振动频率与实验观察的人良好。在分子对接研究中,对研究的葡萄球菌细菌的青霉素结合蛋白评估了研究的分子的抑制潜力。分子中的羰基在抗菌活性中发挥显着作用,通过羰基形成了四个键,其中细菌的关键蛋白质(三个有利的氢键加上一个van der Wa键)的六个相互作用。还通过计算的高结合能(-7.40kcal / mol)表示强抗菌活性。

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