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Universal Multi Gene Panel Testing For Individuals With Pheochromocytomas And Paragangliomas

机译:嗜铬细胞瘤和Paragangliomas的个体通用多基因面板测试

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摘要

Background: Pheochromocytomas (PCCs) and paragangliomas (PGLs) (PPGLs) are a genetically heterogeneous entity, with roughly 25-40% of cases found to harbor a pathogenic or likely pathogenic germline alteration. Existing practice guidelines advocating for the use of a sequential gene testing strategy to identify individuals with hereditary PPGL are driven by the presence of specific clinical features and predate the routine use of multigene panel testing (MGPT). Here we describe results of MGPT for hereditary PPGL in a clinically and ancestrally diverse cohort from a diagnostic laboratory. Methods: Demographic and clinical information of individuals undergoing targeted MGPT for hereditary PPGL were collected from test requisition forms and supporting clinical documents provided by the ordering clinician and retrospectively reviewed. Individuals underwent MGPT of 10-12 genes depending on test order date. From August 2013 through May 2015, 560 individuals had targeted MGPT that included 10 genes (NF1, MAX, SDHA/B/C/D/AF2, RET, TMEM127, and VHL), and from May 2015 through December 2019, 1167 individuals had panel testing of 12 genes due to the addition of MEN1 and FH. Results: Overall, 27.5% of individuals had a pathogenic or likely pathogenic variant (PV), 9.0% had a variant of uncertain significance, and 63.1% had a negative result. Out of all PVs, most were identified in SDHB (40.4%), followed by SDHD (21.1%), SDHA (10.1%), VHL (7.8%), SDHC (6.7%), RET (3.8%), and MAX (3.6%). PVs in FH, MEN1, NF1, SDHAF2, and TMEM127 collectively accounted for 6.5% of PVs. Clinical predictors of a PV included extra-adrenal location, diagnosis before the age of 45 years, multiple tumors, and positive family history (fhx) of PPGL. Affected individuals with a fhx of PPGL were the most likely to have a PV (70.6% of individuals with PCC + fhx; 85.9% of individuals with PGL + fhx). The positive rate in nearly all clinical subgroups even without predictors of a PV remained over 10%, including individuals with a single tumor (PCC = 16.7%; PGL = 46.7%) and those without a fhx (PCC and negative fhx = 15.8%; PGL and negative fhx = 43.7%). Restricting genetic testing of hereditary PPGL to only SDHB/C/D genes misses a third (31.8%) of individuals with PVs. Among individuals with PVs in syndromic genes, over half (41.5%) did not have any additional syndromic features beyond PPGL reported by the ordering clinician. Conclusion: Our data demonstrate a high diagnostic yield in individuals with and without established risk factors, a low inconclusive result rate, numerous individuals with syndromic PVs presenting with isolated PPGL, and a substantial contribution to diagnostic yield from rare genes when included in testing. These findings support updating practice guidelines to incorporate universal testing of all individuals with PPGL and the use of concurrent MGPT as the ideal platform.
机译:背景:Pheochromytomas(PCCs)和Paragangliomas(PPGLS)(PPGLS)是一种基因上异质实体,大约25-40%的病例发现患有病原或可能的致病种改变。倡导使用顺序基因检测策略的现有实践指导方针通过特定的临床特征的存在驱动鉴定具有遗传性PPG1的个体的个体,并预测多烯面板测试的常规使用(MGPT)。在这里,我们在诊断实验室中描述了遗传性PPGL的遗传性PPGP的结果。方法:从检验征用表格中收集到遗传性PPGP的人口统计和临床信息,从测试征用表格中收集,并支持订购临床医生提供的临床文件并回顾性审查。根据测试订单日期,个人接受了10-12个基因的MGPT。从2015年8月至2015年5月,560个个人针对包括10个基因(NF1,MAX,SDHA / B / C / D / D / AF2,RET,TMEM127和VHL)的MGPT,从2015年5月至2019年12月,1167人由于添加MEN1和FH,12个基因的面板测试。结果:总体而言,27.5%的个体具有致病或可能的致病变异(PV),9.0%具有不确定意义的变体,63.1%具有阴性结果。除了所有PVS中,大多数是在SDHB(40.4%)中鉴定的,其次是SDHD(21.1%),SDHA(10.1%),VHL(7.8%),SDHC(6.7%),RET(3.8%)和MAX( 3.6%)。 FH,MEN1,NF1,SDHAF2和TMEM127中的PVS集体占PVS的6.5%。 PV的临床预测因子包括肾上腺位置,45岁以前的诊断,多种肿瘤和PPGL的阳性家庭历史(FHX)。具有FHX的PPGL的受影响的个体最有可能具有PV的PV(70.6%的患有PCC + FHX的个体; 85.9%的人的PGL + FHX)。即使没有PV的预测因子,几乎所有临床亚组的阳性率也超过了10%,包括具有单个肿瘤的个体(PCC = 16.7%; PGL = 46.7%),没有FHX(PCC和负FHX = 15.8%; PGL和负FHX = 43.7%)。限制遗传性PPGL的遗传检测只有SDHB / C / D基因错过了PVS的第三个(31.8%)个体。在综合征基因中具有PVS的个体中,超过一半(41.5%)没有任何额外的综合征特征,以外的PPGL由订购临床医生报告。结论:我们的数据表明,在患有危险因素的情况下,具有危险因素的较高诊断产量,具有较低的不确定结果率,具有分离的PPGL的综合征PVS的众多个体,以及在试验中诊断到罕见基因的诊断产量。这些调查结果支持更新实践指南,以将所有个人的普遍测试纳入PPGL,并使用并发MGPT作为理想平台。

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