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The complete chloroplast genome sequence of the fragrant plant Lavandula angustifolia (Lamiaceae)

机译:芳香植物Lavandula angustifolia(LamiCeae)的完整叶绿体基因组序列

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摘要

Chloroplast (cp) genome sequences have become a useful popular tool for population and phylogeny recently. It is little known about genetics information of Lavandula angustifolia. Here, the complete chloroplast genome of the L. angustifolia has been reconstructed from the whole-genome Illumina sequencing data. The circular genome is 153,448 bp in size, and comprises of a pair of inverted repeat (IR) regions of 25,632 bp each, a large single-copy (LSC) region of 84,588 bp and a small single-copy (SSC) region of 17,596 bp. The total GC content is 38.0%, while the corresponding values of the LSC, SSC, and IR regions are 36.2, 31.8, and 43.2%, respectively. The chloroplast genome contains 132 genes, including 88 protein-coding genes, 8 ribosomal RNA genes, and 37 transfer RNA genes. The Maximum-Likelihood phylogenetic analysis showed a strong sister relationship with Salvia miltiorrhiza in Lamiaceae. These findings provide a foundation for further investigation of cp genome evolution in L. angustifolia and other higher plants.
机译:叶绿体(CP)基因组序列最近已成为群体和文学发生的有用的流行工具。它对Lavandula Angustifolia的遗传信息很了解。这里,已经从全基因组闪光测序数据重建了L.Angustifolia的完整叶绿体基因组。圆形基因组的尺寸为153,448bp,并且包括一对反转的重复(IR)区域,每次为25,632bp,一个大单拷贝(LSC)区域为84,588 bp和17,596的小单拷贝(SSC)区域BP。总GC含量为38.0%,而LSC,SSC和IR区域的相应值分别为36.2,31.8和43.2%。叶绿体基因组含有132个基因,包括88个蛋白质编码基因,8个核糖体RNA基因和37个转移RNA基因。最大似然性系统发育分析显示了与Lamiaceae的丹参米尔蒂氏菌姐妹关系。这些发现提供了进一步调查L.Angustifolia和其他高等植物的CP基因组演变的基础。

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