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Computational Modelling of Large Scale Phage Production Using a Two-Stage Batch Process

机译:使用两阶段批量过程的大规模噬菌体生产的计算模型

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摘要

Cost effective and scalable methods for phage production are required to meet an increasing demand for phage, as an alternative to antibiotics. Computational models can assist the optimization of such production processes. A model is developed here that can simulate the dynamics of phage population growth and production in a two-stage, self-cycling process. The model incorporates variable infection parameters as a function of bacterial growth rate and employs ordinary differential equations, allowing application to a setup with multiple reactors. The model provides simple cost estimates as a function of key operational parameters including substrate concentration, feed volume and cycling times. For the phage and bacteria pairing examined, costs and productivity varied by three orders of magnitude, with the lowest cost found to be most sensitive to the influent substrate concentration and low level setting in the first vessel. An example case study of phage production is also presented, showing how parameter values affect the production costs and estimating production times. The approach presented is flexible and can be used to optimize phage production at laboratory or factory scale by minimizing costs or maximizing productivity.
机译:需要噬菌体生产的成本有效且可扩展的方法来满足对噬菌体的不断增长的需求,以替代抗生素。计算模型可以帮助优化此类生产过程。这里开发了一个模型,该模型可以在两个阶段的自循环过程中模拟噬菌体种群生长和生产的动态。该模型将可变感染参数作为细菌生长速率的函数,并采用常微分方程,从而可应用于具有多个反应器的装置。该模型根据关键操作参数(包括底物浓度,进料量和循环时间)提供简单的成本估算。对于所检查的噬菌体和细菌配对,成本和生产率变化了三个数量级,而最低成本对第一个容器中的进水底物浓度和低水平设置最为敏感。还介绍了噬菌体生产的案例研究,显示了参数值如何影响生产成本并估计生产时间。提出的方法非常灵活,可通过最小化成本或最大化生产率来优化实验室或工厂规模的噬菌体生产。

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